Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC116563.2-201ENST00000624751 535 ntBASIC4.09□□□□□ -1.75
CDH6P55285 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH6P55285 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH6P55285 AP002001.2-201ENST00000529025 1469 ntBASIC4.09□□□□□ -1.75
CDH6P55285 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.09□□□□□ -1.76
CDH6P55285 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDH6P55285 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH6P55285 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH6P55285 RNU6-152P-201ENST00000384037 107 ntBASIC4.08□□□□□ -1.76
CDH6P55285 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH6P55285 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH6P55285 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.08□□□□□ -1.76
CDH6P55285 AL391219.1-201ENST00000422570 483 ntBASIC4.08□□□□□ -1.76
CDH6P55285 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH6P55285 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH6P55285 HMGB1P26-201ENST00000452520 628 ntBASIC4.08□□□□□ -1.76
CDH6P55285 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH6P55285 RPL7P48-201ENST00000461513 746 ntBASIC4.08□□□□□ -1.76
CDH6P55285 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH6P55285 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH6P55285 AC006511.1-201ENST00000470614 315 ntBASIC4.08□□□□□ -1.76
CDH6P55285 AC110792.1-201ENST00000491826 472 ntBASIC4.08□□□□□ -1.76
CDH6P55285 AC106872.2-201ENST00000494303 480 ntBASIC4.08□□□□□ -1.76
CDH6P55285 AC146944.2-203ENST00000502493 354 ntBASIC4.08□□□□□ -1.76
CDH6P55285 AC109458.1-201ENST00000508858 316 ntBASIC4.08□□□□□ -1.76
CDH6P55285 AC139495.1-202ENST00000513164 354 ntBASIC4.08□□□□□ -1.76
CDH6P55285 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH6P55285 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH6P55285 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH6P55285 MIR4458-201ENST00000578872 75 ntBASIC4.08□□□□□ -1.76
CDH6P55285 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.08□□□□□ -1.76
CDH6P55285 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH6P55285 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH6P55285 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH6P55285 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH6P55285 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CDH6P55285 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH6P55285 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH6P55285 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH6P55285 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH6P55285 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH6P55285 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH6P55285 RNU1-13P-201ENST00000384499 162 ntBASIC4.07□□□□□ -1.76
CDH6P55285 UBE2V2P3-201ENST00000433562 437 ntBASIC4.07□□□□□ -1.76
CDH6P55285 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH6P55285 AL356535.1-201ENST00000440335 398 ntBASIC4.07□□□□□ -1.76
CDH6P55285 AC245517.2-201ENST00000442890 346 ntBASIC4.07□□□□□ -1.76
CDH6P55285 RPS17P13-201ENST00000448974 407 ntBASIC4.07□□□□□ -1.76
CDH6P55285 SYT14P1-201ENST00000481459 721 ntBASIC4.07□□□□□ -1.76
CDH6P55285 AC011037.1-201ENST00000483964 558 ntBASIC4.07□□□□□ -1.76
CDH6P55285 HMGB1P47-201ENST00000511281 589 ntBASIC4.07□□□□□ -1.76
CDH6P55285 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH6P55285 AC087369.1-201ENST00000520775 996 ntBASIC4.07□□□□□ -1.76
CDH6P55285 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH6P55285 YPEL5P3-201ENST00000547227 352 ntBASIC4.07□□□□□ -1.76
CDH6P55285 VN1R84P-201ENST00000593697 235 ntBASIC4.07□□□□□ -1.76
CDH6P55285 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH6P55285 MIMT1-201ENST00000597105 1050 ntBASIC4.07□□□□□ -1.76
CDH6P55285 AC068790.5-201ENST00000602741 355 ntBASIC4.07□□□□□ -1.76
CDH6P55285 ABI1P1-201ENST00000603375 1120 ntBASIC4.07□□□□□ -1.76
CDH6P55285 AC005229.3-201ENST00000603438 323 ntBASIC4.07□□□□□ -1.76
CDH6P55285 AL355816.1-201ENST00000607951 118 ntBASIC4.07□□□□□ -1.76
CDH6P55285 AC055764.2-201ENST00000610089 670 ntBASIC4.07□□□□□ -1.76
CDH6P55285 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH6P55285 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CDH6P55285 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH6P55285 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH6P55285 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CDH6P55285 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH6P55285 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH6P55285 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDH6P55285 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH6P55285 XIAPP3-201ENST00000312918 795 ntBASIC4.06□□□□□ -1.76
CDH6P55285 RNU6-185P-201ENST00000384421 107 ntBASIC4.06□□□□□ -1.76
CDH6P55285 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH6P55285 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH6P55285 MTND4P11-201ENST00000417020 1058 ntBASIC4.06□□□□□ -1.76
CDH6P55285 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH6P55285 RPS27AP12-201ENST00000429552 465 ntBASIC4.06□□□□□ -1.76
CDH6P55285 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH6P55285 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.06□□□□□ -1.76
CDH6P55285 ATP5HP2-201ENST00000433885 485 ntBASIC4.06□□□□□ -1.76
CDH6P55285 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH6P55285 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH6P55285 YWHAQP9-201ENST00000445891 512 ntBASIC4.06□□□□□ -1.76
CDH6P55285 MORF4L1P4-201ENST00000450245 976 ntBASIC4.06□□□□□ -1.76
CDH6P55285 AP002345.1-201ENST00000456493 928 ntBASIC4.06□□□□□ -1.76
CDH6P55285 PPIAP15-201ENST00000479662 484 ntBASIC4.06□□□□□ -1.76
CDH6P55285 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH6P55285 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH6P55285 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH6P55285 FTH1P9-201ENST00000513251 355 ntBASIC4.06□□□□□ -1.76
CDH6P55285 AC092593.2-201ENST00000513866 913 ntBASIC4.06□□□□□ -1.76
CDH6P55285 MTCO1P35-201ENST00000515270 228 ntBASIC4.06□□□□□ -1.76
CDH6P55285 MIR2116-201ENST00000517221 80 ntBASIC4.06□□□□□ -1.76
CDH6P55285 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH6P55285 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH6P55285 OR4A12P-201ENST00000530847 918 ntBASIC4.06□□□□□ -1.76
CDH6P55285 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH6P55285 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms