Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 BX323014.1-201ENST00000412876 237 ntBASIC4.37□□□□□ -1.71
NUP98P52948 YWHAEP5-201ENST00000431545 765 ntBASIC4.37□□□□□ -1.71
NUP98P52948 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.37□□□□□ -1.71
NUP98P52948 FCF1P8-201ENST00000510322 597 ntBASIC4.37□□□□□ -1.71
NUP98P52948 HMGB3P13-201ENST00000511263 607 ntBASIC4.37□□□□□ -1.71
NUP98P52948 AC119751.5-201ENST00000514077 770 ntBASIC4.37□□□□□ -1.71
NUP98P52948 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.37□□□□□ -1.71
NUP98P52948 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP98P52948 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP98P52948 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.37□□□□□ -1.71
NUP98P52948 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NUP98P52948 NAMPTP1-201ENST00000440465 2514 ntBASIC4.37□□□□□ -1.71
NUP98P52948 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP98P52948 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.37□□□□□ -1.71
NUP98P52948 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP98P52948 AC125336.1-201ENST00000508893 2827 ntBASIC4.37□□□□□ -1.71
NUP98P52948 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUP98P52948 RSL24D1P1-201ENST00000404972 493 ntBASIC4.37□□□□□ -1.71
NUP98P52948 MTND6P6-201ENST00000478031 263 ntBASIC4.37□□□□□ -1.71
NUP98P52948 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.37□□□□□ -1.71
NUP98P52948 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.37□□□□□ -1.71
NUP98P52948 OR5AP1P-201ENST00000529730 940 ntBASIC4.37□□□□□ -1.71
NUP98P52948 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.37□□□□□ -1.71
NUP98P52948 MIR5680-201ENST00000577577 84 ntBASIC4.37□□□□□ -1.71
NUP98P52948 AC068790.5-201ENST00000602741 355 ntBASIC4.37□□□□□ -1.71
NUP98P52948 AC026422.1-201ENST00000623961 452 ntBASIC4.37□□□□□ -1.71
NUP98P52948 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.37□□□□□ -1.71
NUP98P52948 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NUP98P52948 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP98P52948 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP98P52948 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
NUP98P52948 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP98P52948 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP98P52948 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP98P52948 AL122016.1-201ENST00000403365 367 ntBASIC4.36□□□□□ -1.71
NUP98P52948 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP98P52948 CYCSP10-201ENST00000417973 294 ntBASIC4.36□□□□□ -1.71
NUP98P52948 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP98P52948 RPF2P1-201ENST00000424137 906 ntBASIC4.36□□□□□ -1.71
NUP98P52948 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP98P52948 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.36□□□□□ -1.71
NUP98P52948 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP98P52948 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.36□□□□□ -1.71
NUP98P52948 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP98P52948 MIR7112-201ENST00000616126 65 ntBASIC4.36□□□□□ -1.71
NUP98P52948 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP98P52948 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP98P52948 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NUP98P52948 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP98P52948 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP98P52948 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.36□□□□□ -1.71
NUP98P52948 MIR93-201ENST00000385024 80 ntBASIC4.35□□□□□ -1.71
NUP98P52948 SNORA48.2-201ENST00000390926 124 ntBASIC4.35□□□□□ -1.71
NUP98P52948 OR2X1P-201ENST00000421144 687 ntBASIC4.35□□□□□ -1.71
NUP98P52948 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP98P52948 RPL23AP82-202ENST00000427528 469 ntBASIC4.35□□□□□ -1.71
NUP98P52948 AC073587.1-201ENST00000447093 876 ntBASIC4.35□□□□□ -1.71
NUP98P52948 AC010469.1-201ENST00000463864 576 ntBASIC4.35□□□□□ -1.71
NUP98P52948 CENPBD1P1-201ENST00000464061 469 ntBASIC4.35□□□□□ -1.71
NUP98P52948 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.35□□□□□ -1.71
NUP98P52948 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP98P52948 IGKV2-26-201ENST00000518305 343 ntBASIC4.35□□□□□ -1.71
NUP98P52948 MIR5004-201ENST00000579078 107 ntBASIC4.35□□□□□ -1.71
NUP98P52948 AL583832.1-201ENST00000603227 784 ntBASIC4.35□□□□□ -1.71
NUP98P52948 AC138932.5-201ENST00000617759 563 ntBASIC4.35□□□□□ -1.71
NUP98P52948 SNORD39.4-201ENST00000620099 78 ntBASIC4.35□□□□□ -1.71
NUP98P52948 OR6C71P-202ENST00000641886 1107 ntBASIC4.35□□□□□ -1.71
NUP98P52948 AL133383.2-201ENST00000622958 2336 ntBASIC4.35□□□□□ -1.71
NUP98P52948 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP98P52948 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.35□□□□□ -1.71
NUP98P52948 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.35□□□□□ -1.71
NUP98P52948 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP98P52948 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NUP98P52948 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP98P52948 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NUP98P52948 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NUP98P52948 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.35□□□□□ -1.71
NUP98P52948 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.35□□□□□ -1.71
NUP98P52948 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP98P52948 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP98P52948 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.35□□□□□ -1.71
NUP98P52948 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.35□□□□□ -1.71
NUP98P52948 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.35□□□□□ -1.71
NUP98P52948 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.35□□□□□ -1.71
NUP98P52948 UBE2NP1-201ENST00000545592 458 ntBASIC4.35□□□□□ -1.71
NUP98P52948 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP98P52948 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP98P52948 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP98P52948 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP98P52948 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NUP98P52948 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
NUP98P52948 BMS1P3-201ENST00000372011 932 ntBASIC4.34□□□□□ -1.71
NUP98P52948 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.34□□□□□ -1.71
NUP98P52948 AL671855.1-201ENST00000446875 1203 ntBASIC4.34□□□□□ -1.71
NUP98P52948 AC097462.2-201ENST00000504623 481 ntBASIC4.34□□□□□ -1.71
NUP98P52948 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NUP98P52948 SCARNA13-201ENST00000516672 275 ntBASIC4.34□□□□□ -1.71
NUP98P52948 AC008489.1-201ENST00000524271 483 ntBASIC4.34□□□□□ -1.71
NUP98P52948 AC011611.1-201ENST00000552179 197 ntBASIC4.34□□□□□ -1.71
NUP98P52948 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms