Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
NEK3P51956 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NEK3P51956 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NEK3P51956 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEK3P51956 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NEK3P51956 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEK3P51956 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.15□□□□□ -1.59
NEK3P51956 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
NEK3P51956 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEK3P51956 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.15□□□□□ -1.59
NEK3P51956 ZNF37BP-203ENST00000452306 1352 ntBASIC5.15□□□□□ -1.59
NEK3P51956 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NEK3P51956 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
NEK3P51956 AC073429.2-201ENST00000569694 1444 ntBASIC5.14□□□□□ -1.59
NEK3P51956 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEK3P51956 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEK3P51956 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.14□□□□□ -1.59
NEK3P51956 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEK3P51956 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NEK3P51956 AC083843.3-201ENST00000623679 2186 ntBASIC5.14□□□□□ -1.59
NEK3P51956 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEK3P51956 SNORA66-201ENST00000384792 133 ntBASIC5.14□□□□□ -1.59
NEK3P51956 AC073264.1-201ENST00000411508 416 ntBASIC5.14□□□□□ -1.59
NEK3P51956 AC004987.3-201ENST00000413879 771 ntBASIC5.14□□□□□ -1.59
NEK3P51956 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.14□□□□□ -1.59
NEK3P51956 AC012519.1-201ENST00000424588 610 ntBASIC5.14□□□□□ -1.59
NEK3P51956 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.14□□□□□ -1.59
NEK3P51956 RPL31P54-201ENST00000429803 370 ntBASIC5.14□□□□□ -1.59
NEK3P51956 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.14□□□□□ -1.59
NEK3P51956 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.14□□□□□ -1.59
NEK3P51956 MTND2P20-201ENST00000440805 661 ntBASIC5.14□□□□□ -1.59
NEK3P51956 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.14□□□□□ -1.59
NEK3P51956 EXTL2P1-201ENST00000446218 416 ntBASIC5.14□□□□□ -1.59
NEK3P51956 AC093166.2-201ENST00000455969 1017 ntBASIC5.14□□□□□ -1.59
NEK3P51956 snoU13.20-201ENST00000459180 104 ntBASIC5.14□□□□□ -1.59
NEK3P51956 RPL21P103-201ENST00000479921 488 ntBASIC5.14□□□□□ -1.59
NEK3P51956 COX6B1P5-201ENST00000509843 249 ntBASIC5.14□□□□□ -1.59
NEK3P51956 AC016065.2-201ENST00000514530 444 ntBASIC5.14□□□□□ -1.59
NEK3P51956 AF186190.1-201ENST00000517470 480 ntBASIC5.14□□□□□ -1.59
NEK3P51956 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.14□□□□□ -1.59
NEK3P51956 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.14□□□□□ -1.59
NEK3P51956 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.14□□□□□ -1.59
NEK3P51956 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.14□□□□□ -1.59
NEK3P51956 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEK3P51956 AC125611.1-201ENST00000549563 229 ntBASIC5.14□□□□□ -1.59
NEK3P51956 AL389895.1-201ENST00000554127 252 ntBASIC5.14□□□□□ -1.59
NEK3P51956 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.14□□□□□ -1.59
NEK3P51956 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.14□□□□□ -1.59
NEK3P51956 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEK3P51956 RN7SL802P-201ENST00000577858 299 ntBASIC5.14□□□□□ -1.59
NEK3P51956 MIR4436B2-201ENST00000581415 91 ntBASIC5.14□□□□□ -1.59
NEK3P51956 MIR4436B1-201ENST00000583272 91 ntBASIC5.14□□□□□ -1.59
NEK3P51956 MIR4691-201ENST00000583764 85 ntBASIC5.14□□□□□ -1.59
NEK3P51956 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.14□□□□□ -1.59
NEK3P51956 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.14□□□□□ -1.59
NEK3P51956 DPRXP5-201ENST00000604662 539 ntBASIC5.14□□□□□ -1.59
NEK3P51956 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.14□□□□□ -1.59
NEK3P51956 AL049539.1-201ENST00000611964 459 ntBASIC5.14□□□□□ -1.59
NEK3P51956 AL627230.1-201ENST00000613077 211 ntBASIC5.14□□□□□ -1.59
NEK3P51956 AL591926.8-201ENST00000616876 211 ntBASIC5.14□□□□□ -1.59
NEK3P51956 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.14□□□□□ -1.59
NEK3P51956 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.14□□□□□ -1.59
NEK3P51956 AC120349.2-201ENST00000625002 298 ntBASIC5.14□□□□□ -1.59
NEK3P51956 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.14□□□□□ -1.59
NEK3P51956 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NEK3P51956 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEK3P51956 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEK3P51956 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NEK3P51956 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NEK3P51956 INTS6P1-201ENST00000504674 2530 ntBASIC5.14□□□□□ -1.59
NEK3P51956 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NEK3P51956 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NEK3P51956 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
NEK3P51956 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEK3P51956 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEK3P51956 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NEK3P51956 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEK3P51956 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEK3P51956 AP000776.1-201ENST00000530032 1663 ntBASIC5.13□□□□□ -1.59
NEK3P51956 RN7SKP104-201ENST00000362605 328 ntBASIC5.13□□□□□ -1.59
NEK3P51956 RNA5SP123-201ENST00000363244 119 ntBASIC5.13□□□□□ -1.59
NEK3P51956 Y_RNA.311-201ENST00000365068 96 ntBASIC5.13□□□□□ -1.59
NEK3P51956 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
NEK3P51956 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NEK3P51956 RNU2-28P-201ENST00000410457 189 ntBASIC5.13□□□□□ -1.59
NEK3P51956 AL008987.1-201ENST00000415528 237 ntBASIC5.13□□□□□ -1.59
NEK3P51956 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.13□□□□□ -1.59
NEK3P51956 AC013429.2-201ENST00000418798 781 ntBASIC5.13□□□□□ -1.59
NEK3P51956 RPL36AP10-201ENST00000421785 322 ntBASIC5.13□□□□□ -1.59
NEK3P51956 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.13□□□□□ -1.59
NEK3P51956 AC010099.3-201ENST00000423896 409 ntBASIC5.13□□□□□ -1.59
NEK3P51956 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.13□□□□□ -1.59
NEK3P51956 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.13□□□□□ -1.59
NEK3P51956 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.13□□□□□ -1.59
NEK3P51956 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NEK3P51956 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.13□□□□□ -1.59
NEK3P51956 AL139824.2-201ENST00000458731 1095 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms