Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 VDAC2P1-201ENST00000399358 958 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 HMGB1P13-201ENST00000406019 642 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 FCF1P5-201ENST00000406490 482 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.74□□□□□ -1.81
HCFC1P51610 PTP4A1P1-201ENST00000420539 515 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HCFC1P51610 AC093422.3-201ENST00000428506 305 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.74□□□□□ -1.81
HCFC1P51610 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.74□□□□□ -1.81
HCFC1P51610 NDUFA5P10-201ENST00000432147 357 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.74□□□□□ -1.81
HCFC1P51610 RPS27AP15-201ENST00000447672 466 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 HMGB1P26-201ENST00000452520 628 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.74□□□□□ -1.81
HCFC1P51610 RPL23AP2-201ENST00000471227 466 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 SUMO1P1-201ENST00000497904 306 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.74□□□□□ -1.81
HCFC1P51610 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.74□□□□□ -1.81
HCFC1P51610 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.74□□□□□ -1.81
HCFC1P51610 ZNF971P-201ENST00000562068 1249 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 AC120057.2-201ENST00000571520 271 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.74□□□□□ -1.81
HCFC1P51610 AC091178.1-203ENST00000584586 279 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.74□□□□□ -1.81
HCFC1P51610 AC008739.3-201ENST00000603262 127 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.74□□□□□ -1.81
HCFC1P51610 AL445435.1-201ENST00000604232 665 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.74□□□□□ -1.81
HCFC1P51610 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.74□□□□□ -1.81
HCFC1P51610 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HCFC1P51610 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HCFC1P51610 NXPH1-205ENST00000602349 1953 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HCFC1P51610 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.74□□□□□ -1.81
HCFC1P51610 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HCFC1P51610 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.74□□□□□ -1.81
HCFC1P51610 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.74□□□□□ -1.81
HCFC1P51610 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.74□□□□□ -1.81
HCFC1P51610 RNU4-44P-201ENST00000363050 141 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.73□□□□□ -1.81
HCFC1P51610 RN7SKP182-201ENST00000410772 298 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 RN7SKP247-201ENST00000411094 308 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AC005005.2-201ENST00000420779 380 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AC092447.3-201ENST00000426027 686 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AC093716.1-201ENST00000435923 377 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HCFC1P51610 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.73□□□□□ -1.81
HCFC1P51610 RPS29P7-201ENST00000439662 171 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.73□□□□□ -1.81
HCFC1P51610 Z73417.1-201ENST00000447373 778 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AC069277.2-201ENST00000454211 432 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 RPL5P30-201ENST00000465511 891 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.73□□□□□ -1.81
HCFC1P51610 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.73□□□□□ -1.81
HCFC1P51610 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.73□□□□□ -1.81
HCFC1P51610 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.73□□□□□ -1.81
HCFC1P51610 MIR548Y-201ENST00000582739 110 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AC017100.2-201ENST00000584628 355 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.73□□□□□ -1.81
HCFC1P51610 AC079587.1-201ENST00000603846 277 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AC099785.1-201ENST00000605697 437 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AC025175.1-201ENST00000606482 759 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AC006386.1-201ENST00000619436 415 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.73□□□□□ -1.81
HCFC1P51610 AC004777.1-201ENST00000624317 287 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.73□□□□□ -1.81
HCFC1P51610 AC006927.2-201ENST00000639256 389 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AC139713.2-210ENST00000641741 992 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HCFC1P51610 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HCFC1P51610 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 MFSD8-242ENST00000641690 4199 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.73□□□□□ -1.81
HCFC1P51610 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HCFC1P51610 RLIMP1-201ENST00000339626 1680 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HCFC1P51610 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HCFC1P51610 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HCFC1P51610 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HCFC1P51610 RNU6-532P-201ENST00000384318 107 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HCFC1P51610 MTND2P5-201ENST00000432656 1006 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AC007389.2-201ENST00000434630 306 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 SNRPFP2-201ENST00000440710 251 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.73□□□□□ -1.81
HCFC1P51610 ELOCP13-201ENST00000443934 329 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.73□□□□□ -1.81
HCFC1P51610 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.73□□□□□ -1.81
HCFC1P51610 AC134050.1-201ENST00000495088 933 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 PARP4P3-201ENST00000510265 317 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.73□□□□□ -1.81
HCFC1P51610 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.73□□□□□ -1.81
HCFC1P51610 AC118942.1-201ENST00000529674 1035 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.73□□□□□ -1.81
HCFC1P51610 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.73□□□□□ -1.81
HCFC1P51610 SNORD39.2-201ENST00000579995 76 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.73□□□□□ -1.81
HCFC1P51610 AL121772.2-201ENST00000614331 297 ntBASIC3.73□□□□□ -1.81
HCFC1P51610 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms