Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AP003486.1-201ENST00000525716 3994 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF144AP50876 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF144AP50876 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF144AP50876 AC121333.1-201ENST00000567488 2709 ntBASIC6.31□□□□□ -1.4
RNF144AP50876 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF144AP50876 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF144AP50876 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF144AP50876 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF144AP50876 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RNF144AP50876 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF144AP50876 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.3□□□□□ -1.4
RNF144AP50876 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RNF144AP50876 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RNF144AP50876 OLMALINC-203ENST00000641087 3779 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
RNF144AP50876 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF144AP50876 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF144AP50876 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF144AP50876 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
RNF144AP50876 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RNF144AP50876 RNY3P13-201ENST00000365542 102 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 Y_RNA.512-201ENST00000384518 102 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 MIR558-201ENST00000384920 94 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.3□□□□□ -1.4
RNF144AP50876 AC048351.1-201ENST00000420064 602 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 AC093155.2-201ENST00000420734 937 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 NME1P1-201ENST00000420914 382 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 AC007562.1-201ENST00000421819 517 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.3□□□□□ -1.4
RNF144AP50876 AC009518.3-201ENST00000438972 253 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 RPS10P18-201ENST00000442662 495 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF144AP50876 RPL7P52-201ENST00000449200 742 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 AL118520.1-201ENST00000450770 291 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 GSTA11P-201ENST00000452866 669 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.3□□□□□ -1.4
RNF144AP50876 RN7SL216P-201ENST00000471607 298 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 RPS16P9-201ENST00000477220 427 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.3□□□□□ -1.4
RNF144AP50876 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.3□□□□□ -1.4
RNF144AP50876 RPL22P13-201ENST00000493291 347 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 RN7SL187P-201ENST00000495587 303 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 TECRP2-201ENST00000503270 928 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF144AP50876 VN1R104P-201ENST00000505115 1009 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 RN7SKP11-201ENST00000517018 287 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 RNA5SP503-201ENST00000517047 117 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 AC140063.1-201ENST00000541343 259 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 AC068993.1-201ENST00000546724 589 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF144AP50876 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF144AP50876 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.3□□□□□ -1.4
RNF144AP50876 AC124068.1-201ENST00000563131 678 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF144AP50876 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RNF144AP50876 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.3□□□□□ -1.4
RNF144AP50876 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF144AP50876 AC008013.2-202ENST00000637965 364 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RNF144AP50876 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RNF144AP50876 KPNA2P1-201ENST00000458289 1591 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RNF144AP50876 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF144AP50876 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF144AP50876 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF144AP50876 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
RNF144AP50876 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
RNF144AP50876 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF144AP50876 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RNF144AP50876 AC140479.2-201ENST00000421567 3130 ntBASIC6.3□□□□□ -1.4
RNF144AP50876 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.3□□□□□ -1.4
RNF144AP50876 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 AL158163.1-201ENST00000603915 1649 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF144AP50876 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
RNF144AP50876 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
RNF144AP50876 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 RNU6-28P-201ENST00000362378 107 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 Y_RNA.212-201ENST00000364177 102 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.29□□□□□ -1.4
RNF144AP50876 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF144AP50876 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF144AP50876 AL591848.1-201ENST00000413092 322 ntBASIC6.29□□□□□ -1.4
RNF144AP50876 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms