Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 NPM1P24-201ENST00000428039 894 ntBASIC4.46□□□□□ -1.7
LHX1P48742 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.46□□□□□ -1.7
LHX1P48742 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.46□□□□□ -1.7
LHX1P48742 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.46□□□□□ -1.7
LHX1P48742 AC068135.1-201ENST00000446164 246 ntBASIC4.46□□□□□ -1.7
LHX1P48742 AC005008.1-201ENST00000456151 612 ntBASIC4.46□□□□□ -1.7
LHX1P48742 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.46□□□□□ -1.7
LHX1P48742 AL161747.1-201ENST00000480068 358 ntBASIC4.46□□□□□ -1.7
LHX1P48742 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.46□□□□□ -1.7
LHX1P48742 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.46□□□□□ -1.7
LHX1P48742 AC008565.1-201ENST00000509046 885 ntBASIC4.46□□□□□ -1.7
LHX1P48742 AC104108.1-201ENST00000509930 412 ntBASIC4.46□□□□□ -1.7
LHX1P48742 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.46□□□□□ -1.7
LHX1P48742 RN7SKP21-201ENST00000516503 220 ntBASIC4.46□□□□□ -1.7
LHX1P48742 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.46□□□□□ -1.7
LHX1P48742 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LHX1P48742 AL353600.1-201ENST00000608148 251 ntBASIC4.46□□□□□ -1.7
LHX1P48742 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.46□□□□□ -1.7
LHX1P48742 AC022306.3-201ENST00000619930 550 ntBASIC4.46□□□□□ -1.7
LHX1P48742 AC007275.1-201ENST00000621243 671 ntBASIC4.46□□□□□ -1.7
LHX1P48742 AC112484.5-201ENST00000624189 228 ntBASIC4.46□□□□□ -1.7
LHX1P48742 AC068724.3-201ENST00000625906 87 ntBASIC4.46□□□□□ -1.7
LHX1P48742 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
LHX1P48742 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LHX1P48742 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LHX1P48742 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.46□□□□□ -1.7
LHX1P48742 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
LHX1P48742 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LHX1P48742 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LHX1P48742 AC009229.4-201ENST00000623854 1947 ntBASIC4.45□□□□□ -1.7
LHX1P48742 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LHX1P48742 AC234772.1-201ENST00000377927 937 ntBASIC4.45□□□□□ -1.7
LHX1P48742 RNU6-178P-201ENST00000384631 104 ntBASIC4.45□□□□□ -1.7
LHX1P48742 ENSAP1-201ENST00000392855 326 ntBASIC4.45□□□□□ -1.7
LHX1P48742 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LHX1P48742 VN1R8P-201ENST00000407739 893 ntBASIC4.45□□□□□ -1.7
LHX1P48742 RNA5SP317-201ENST00000410176 116 ntBASIC4.45□□□□□ -1.7
LHX1P48742 RNA5SP311-201ENST00000411290 116 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AC092745.2-202ENST00000411880 369 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.45□□□□□ -1.7
LHX1P48742 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.45□□□□□ -1.7
LHX1P48742 AL590609.2-201ENST00000421430 368 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.45□□□□□ -1.7
LHX1P48742 AC241520.1-201ENST00000422654 1099 ntBASIC4.45□□□□□ -1.7
LHX1P48742 PDSS1P1-201ENST00000422953 1114 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AC009965.2-201ENST00000425328 970 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.45□□□□□ -1.7
LHX1P48742 AC092017.2-201ENST00000427600 362 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.45□□□□□ -1.7
LHX1P48742 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
LHX1P48742 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LHX1P48742 AC092170.1-201ENST00000440211 356 ntBASIC4.45□□□□□ -1.7
LHX1P48742 HSFY3P-201ENST00000444242 1191 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.45□□□□□ -1.7
LHX1P48742 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.45□□□□□ -1.7
LHX1P48742 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LHX1P48742 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.45□□□□□ -1.7
LHX1P48742 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.45□□□□□ -1.7
LHX1P48742 AF213884.1-201ENST00000488102 463 ntBASIC4.45□□□□□ -1.7
LHX1P48742 RN7SL604P-201ENST00000492589 296 ntBASIC4.45□□□□□ -1.7
LHX1P48742 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.45□□□□□ -1.7
LHX1P48742 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.45□□□□□ -1.7
LHX1P48742 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LHX1P48742 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.45□□□□□ -1.7
LHX1P48742 RNA5SP315-201ENST00000516340 116 ntBASIC4.45□□□□□ -1.7
LHX1P48742 RNA5SP312-201ENST00000517068 116 ntBASIC4.45□□□□□ -1.7
LHX1P48742 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.45□□□□□ -1.7
LHX1P48742 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.45□□□□□ -1.7
LHX1P48742 AC122134.1-202ENST00000569111 1201 ntBASIC4.45□□□□□ -1.7
LHX1P48742 MIR4789-201ENST00000577469 82 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AC090666.1-201ENST00000578241 445 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.45□□□□□ -1.7
LHX1P48742 AC008507.2-201ENST00000588402 1176 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.45□□□□□ -1.7
LHX1P48742 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.45□□□□□ -1.7
LHX1P48742 AL355816.1-201ENST00000607951 118 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AC097504.2-201ENST00000608088 454 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AC006946.3-201ENST00000609791 756 ntBASIC4.45□□□□□ -1.7
LHX1P48742 ZYXP1-201ENST00000617638 118 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AC068831.8-201ENST00000620171 435 ntBASIC4.45□□□□□ -1.7
LHX1P48742 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.45□□□□□ -1.7
LHX1P48742 AC006927.2-201ENST00000639256 389 ntBASIC4.45□□□□□ -1.7
LHX1P48742 AC092162.3-201ENST00000624511 1624 ntBASIC4.45□□□□□ -1.7
LHX1P48742 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LHX1P48742 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LHX1P48742 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
LHX1P48742 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.45□□□□□ -1.7
LHX1P48742 AC005332.5-201ENST00000591222 2919 ntBASIC4.45□□□□□ -1.7
LHX1P48742 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.45□□□□□ -1.7
LHX1P48742 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LHX1P48742 ZNF849P-201ENST00000594711 1566 ntBASIC4.44□□□□□ -1.7
LHX1P48742 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.44□□□□□ -1.7
LHX1P48742 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LHX1P48742 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LHX1P48742 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
LHX1P48742 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LHX1P48742 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LHX1P48742 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
LHX1P48742 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LHX1P48742 AL445437.1-201ENST00000623157 3087 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms