Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 NF1P3-201ENST00000457709 450 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.89□□□□□ -1.79
NKX2-1P43699 AC005410.1-202ENST00000460347 485 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX2-1P43699 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 RNU6-202P-201ENST00000515998 96 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.89□□□□□ -1.79
NKX2-1P43699 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.89□□□□□ -1.79
NKX2-1P43699 FKBP1BP1-201ENST00000553366 325 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX2-1P43699 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX2-1P43699 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.89□□□□□ -1.79
NKX2-1P43699 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.89□□□□□ -1.79
NKX2-1P43699 AC093519.1-201ENST00000566109 298 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AC074051.3-201ENST00000570238 358 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AC012146.2-201ENST00000576545 416 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 HMGB2P1-201ENST00000591146 634 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AC087283.1-201ENST00000604029 1074 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AC007349.4-201ENST00000608114 532 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AL354760.1-201ENST00000608357 643 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AC023158.2-201ENST00000614876 543 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.89□□□□□ -1.79
NKX2-1P43699 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.89□□□□□ -1.79
NKX2-1P43699 AC026634.1-201ENST00000634369 198 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 MIR1322-201ENST00000638013 71 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 MIR4302-201ENST00000638058 60 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 FAM157B-203ENST00000639350 358 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 OR52B5P-202ENST00000641118 1110 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
NKX2-1P43699 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
NKX2-1P43699 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
NKX2-1P43699 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.89□□□□□ -1.79
NKX2-1P43699 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.89□□□□□ -1.79
NKX2-1P43699 AP005901.5-201ENST00000545779 1796 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.89□□□□□ -1.79
NKX2-1P43699 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NKX2-1P43699 AC015813.6-201ENST00000624409 5808 ntBASIC3.89□□□□□ -1.79
NKX2-1P43699 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
NKX2-1P43699 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-1P43699 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
NKX2-1P43699 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-1P43699 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.88□□□□□ -1.79
NKX2-1P43699 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NKX2-1P43699 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-1P43699 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NKX2-1P43699 RNU6-582P-201ENST00000362989 107 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 RNU6-1066P-201ENST00000363573 105 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 U3.25-201ENST00000391209 220 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 ARL4AP5-201ENST00000404372 599 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 RNA5SP345-201ENST00000410646 108 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 NPM1P4-201ENST00000414095 812 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 TBCAP2-201ENST00000416175 326 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC007435.1-201ENST00000421086 415 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC009237.2-201ENST00000421358 284 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX2-1P43699 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.88□□□□□ -1.79
NKX2-1P43699 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.88□□□□□ -1.79
NKX2-1P43699 AC008065.1-201ENST00000428525 348 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC007559.1-201ENST00000428736 355 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC005033.1-201ENST00000428904 813 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX2-1P43699 AL391987.1-201ENST00000441025 200 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AL034418.1-201ENST00000448675 860 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX2-1P43699 AC079776.3-201ENST00000450665 370 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.88□□□□□ -1.79
NKX2-1P43699 snoU13.7-201ENST00000459220 104 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC026348.1-201ENST00000462549 1053 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.88□□□□□ -1.79
NKX2-1P43699 RN7SL97P-201ENST00000486780 299 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX2-1P43699 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.88□□□□□ -1.79
NKX2-1P43699 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NKX2-1P43699 AC025674.1-201ENST00000507074 324 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX2-1P43699 IGKV2-18-201ENST00000522607 343 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.88□□□□□ -1.79
NKX2-1P43699 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX2-1P43699 SMARCE1P3-201ENST00000553649 1231 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 MTCYBP27-201ENST00000555160 670 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX2-1P43699 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.88□□□□□ -1.79
NKX2-1P43699 EIF5A2P1-201ENST00000564027 460 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC009094.1-201ENST00000564443 426 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.88□□□□□ -1.79
NKX2-1P43699 AC069366.1-201ENST00000583159 838 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 FKBP1AP1-201ENST00000594588 318 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC091057.2-201ENST00000602594 792 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC095055.1-201ENST00000603472 1113 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.88□□□□□ -1.79
NKX2-1P43699 AC097065.2-201ENST00000608159 533 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC092106.3-201ENST00000611308 722 ntBASIC3.88□□□□□ -1.79
NKX2-1P43699 AC109309.2-201ENST00000612597 332 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms