Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL15A1P39059 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL15A1P39059 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.47□□□□□ -1.53
COL15A1P39059 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
COL15A1P39059 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
COL15A1P39059 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.46□□□□□ -1.53
COL15A1P39059 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL15A1P39059 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL15A1P39059 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.46□□□□□ -1.54
COL15A1P39059 RNU6-249P-201ENST00000363016 102 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 SNORA62.3-201ENST00000365110 153 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL15A1P39059 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.46□□□□□ -1.54
COL15A1P39059 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.46□□□□□ -1.54
COL15A1P39059 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.46□□□□□ -1.54
COL15A1P39059 RPL7P2-201ENST00000427639 268 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.46□□□□□ -1.54
COL15A1P39059 RPL34P26-201ENST00000445636 354 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 PSMC1P13-201ENST00000458195 985 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 MTCO3P35-201ENST00000485582 781 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 AC108022.1-201ENST00000493466 478 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 AC023050.1-201ENST00000498198 304 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.46□□□□□ -1.54
COL15A1P39059 AC146944.2-203ENST00000502493 354 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.46□□□□□ -1.54
COL15A1P39059 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.46□□□□□ -1.54
COL15A1P39059 AC113420.1-201ENST00000507903 571 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.46□□□□□ -1.54
COL15A1P39059 AC139495.1-202ENST00000513164 354 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.46□□□□□ -1.54
COL15A1P39059 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.46□□□□□ -1.54
COL15A1P39059 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.46□□□□□ -1.54
COL15A1P39059 DYNLL1P4-201ENST00000549314 266 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.46□□□□□ -1.54
COL15A1P39059 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.46□□□□□ -1.54
COL15A1P39059 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.46□□□□□ -1.54
COL15A1P39059 AC025811.1-201ENST00000604312 472 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
COL15A1P39059 AC011330.2-201ENST00000621680 635 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 AC104985.3-201ENST00000623479 597 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 AC068057.2-201ENST00000624047 895 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL15A1P39059 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL15A1P39059 AL355578.1-201ENST00000607405 1328 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL15A1P39059 AC010300.1-201ENST00000600671 5134 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.46□□□□□ -1.54
COL15A1P39059 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL15A1P39059 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.46□□□□□ -1.54
COL15A1P39059 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.46□□□□□ -1.54
COL15A1P39059 TTC39DP-201ENST00000416781 1688 ntBASIC5.46□□□□□ -1.54
COL15A1P39059 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL15A1P39059 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL15A1P39059 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.45□□□□□ -1.54
COL15A1P39059 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL15A1P39059 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL15A1P39059 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
COL15A1P39059 RNA5SP27-201ENST00000363839 119 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 RNA5SP175-201ENST00000364275 119 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL15A1P39059 DNAJC19P6-201ENST00000401853 280 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 AL078604.1-201ENST00000404609 466 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 RN7SKP182-201ENST00000410772 298 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 VPS26BP1-201ENST00000417155 755 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.45□□□□□ -1.54
COL15A1P39059 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.45□□□□□ -1.54
COL15A1P39059 MTATP6P26-201ENST00000445926 662 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
COL15A1P39059 SEPT14P24-201ENST00000447236 180 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.45□□□□□ -1.54
COL15A1P39059 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.45□□□□□ -1.54
COL15A1P39059 NPM1P41-201ENST00000512920 831 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.45□□□□□ -1.54
COL15A1P39059 AC104417.1-201ENST00000523974 751 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 NDUFS5P6-201ENST00000529136 295 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 DUXAP5-201ENST00000529668 529 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 AC023538.1-201ENST00000534576 736 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.45□□□□□ -1.54
COL15A1P39059 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.45□□□□□ -1.54
COL15A1P39059 AL109741.3-201ENST00000561748 592 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 AL355493.4-201ENST00000618530 292 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 AC119674.1-212ENST00000641155 993 ntBASIC5.45□□□□□ -1.54
COL15A1P39059 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL15A1P39059 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
COL15A1P39059 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL15A1P39059 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
COL15A1P39059 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL15A1P39059 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL15A1P39059 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL15A1P39059 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.45□□□□□ -1.54
COL15A1P39059 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
COL15A1P39059 Y_RNA.578-201ENST00000390903 88 ntBASIC5.44□□□□□ -1.54
COL15A1P39059 RNU6-932P-201ENST00000391108 106 ntBASIC5.44□□□□□ -1.54
COL15A1P39059 ENSAP1-201ENST00000392855 326 ntBASIC5.44□□□□□ -1.54
COL15A1P39059 RNA5SP44-201ENST00000410446 133 ntBASIC5.44□□□□□ -1.54
COL15A1P39059 RN7SKP97-201ENST00000410966 333 ntBASIC5.44□□□□□ -1.54
COL15A1P39059 AC105402.1-201ENST00000413336 545 ntBASIC5.44□□□□□ -1.54
COL15A1P39059 MTND4P3-201ENST00000417829 541 ntBASIC5.44□□□□□ -1.54
COL15A1P39059 AC005005.2-201ENST00000420779 380 ntBASIC5.44□□□□□ -1.54
COL15A1P39059 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms