Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ATP5A1P2-201ENST00000412323 255 ntBASIC4.84□□□□□ -1.63
RFC4P35249 AL391219.1-201ENST00000422570 483 ntBASIC4.84□□□□□ -1.63
RFC4P35249 AL355994.1-201ENST00000424379 260 ntBASIC4.84□□□□□ -1.63
RFC4P35249 AL390879.2-203ENST00000426943 1121 ntBASIC4.84□□□□□ -1.63
RFC4P35249 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.84□□□□□ -1.63
RFC4P35249 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.84□□□□□ -1.63
RFC4P35249 SETD6P1-201ENST00000444575 317 ntBASIC4.84□□□□□ -1.63
RFC4P35249 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.84□□□□□ -1.63
RFC4P35249 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.84□□□□□ -1.63
RFC4P35249 AC105918.1-201ENST00000474399 838 ntBASIC4.84□□□□□ -1.63
RFC4P35249 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.84□□□□□ -1.63
RFC4P35249 AC113398.2-201ENST00000507630 558 ntBASIC4.84□□□□□ -1.63
RFC4P35249 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFC4P35249 MTCO3P42-201ENST00000509488 518 ntBASIC4.84□□□□□ -1.63
RFC4P35249 MTCO3P39-201ENST00000514812 518 ntBASIC4.84□□□□□ -1.63
RFC4P35249 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.84□□□□□ -1.63
RFC4P35249 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.84□□□□□ -1.63
RFC4P35249 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.84□□□□□ -1.63
RFC4P35249 AC026979.4-201ENST00000606555 645 ntBASIC4.84□□□□□ -1.63
RFC4P35249 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RFC4P35249 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.84□□□□□ -1.63
RFC4P35249 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
RFC4P35249 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
RFC4P35249 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
RFC4P35249 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFC4P35249 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.83□□□□□ -1.64
RFC4P35249 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFC4P35249 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFC4P35249 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.83□□□□□ -1.64
RFC4P35249 MIR199A2-201ENST00000385289 110 ntBASIC4.83□□□□□ -1.64
RFC4P35249 RPL7P60-201ENST00000397636 735 ntBASIC4.83□□□□□ -1.64
RFC4P35249 VN1R8P-201ENST00000407739 893 ntBASIC4.83□□□□□ -1.64
RFC4P35249 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.83□□□□□ -1.64
RFC4P35249 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.83□□□□□ -1.64
RFC4P35249 AC097713.2-201ENST00000430199 356 ntBASIC4.83□□□□□ -1.64
RFC4P35249 AC073063.1-201ENST00000434352 607 ntBASIC4.83□□□□□ -1.64
RFC4P35249 AC092013.1-201ENST00000438795 332 ntBASIC4.83□□□□□ -1.64
RFC4P35249 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.83□□□□□ -1.64
RFC4P35249 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFC4P35249 OR6C72P-201ENST00000451403 892 ntBASIC4.83□□□□□ -1.64
RFC4P35249 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RFC4P35249 AC021205.1-201ENST00000468797 348 ntBASIC4.83□□□□□ -1.64
RFC4P35249 AC008694.2-201ENST00000517591 306 ntBASIC4.83□□□□□ -1.64
RFC4P35249 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.83□□□□□ -1.64
RFC4P35249 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.83□□□□□ -1.64
RFC4P35249 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.83□□□□□ -1.64
RFC4P35249 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.83□□□□□ -1.64
RFC4P35249 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.83□□□□□ -1.64
RFC4P35249 AC018552.3-201ENST00000567416 561 ntBASIC4.83□□□□□ -1.64
RFC4P35249 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.83□□□□□ -1.64
RFC4P35249 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.83□□□□□ -1.64
RFC4P35249 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.83□□□□□ -1.64
RFC4P35249 AC055839.1-201ENST00000634467 498 ntBASIC4.83□□□□□ -1.64
RFC4P35249 AC119674.1-207ENST00000641355 633 ntBASIC4.83□□□□□ -1.64
RFC4P35249 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFC4P35249 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFC4P35249 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFC4P35249 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.83□□□□□ -1.64
RFC4P35249 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.83□□□□□ -1.64
RFC4P35249 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.83□□□□□ -1.64
RFC4P35249 AC114546.3-201ENST00000623582 1734 ntBASIC4.83□□□□□ -1.64
RFC4P35249 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.83□□□□□ -1.64
RFC4P35249 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFC4P35249 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFC4P35249 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFC4P35249 AC007342.7-201ENST00000624610 2337 ntBASIC4.82□□□□□ -1.64
RFC4P35249 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFC4P35249 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFC4P35249 RNA5SP50-201ENST00000363731 107 ntBASIC4.82□□□□□ -1.64
RFC4P35249 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFC4P35249 MIR490-201ENST00000384865 128 ntBASIC4.82□□□□□ -1.64
RFC4P35249 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFC4P35249 RNU6-603P-201ENST00000411403 107 ntBASIC4.82□□□□□ -1.64
RFC4P35249 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.82□□□□□ -1.64
RFC4P35249 SKP1P3-201ENST00000429280 487 ntBASIC4.82□□□□□ -1.64
RFC4P35249 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.82□□□□□ -1.64
RFC4P35249 HMGB1P37-201ENST00000439613 609 ntBASIC4.82□□□□□ -1.64
RFC4P35249 MTCYBP14-201ENST00000457471 715 ntBASIC4.82□□□□□ -1.64
RFC4P35249 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
RFC4P35249 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.82□□□□□ -1.64
RFC4P35249 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.82□□□□□ -1.64
RFC4P35249 RN7SKP13-201ENST00000515933 244 ntBASIC4.82□□□□□ -1.64
RFC4P35249 RNU6-319P-201ENST00000516025 108 ntBASIC4.82□□□□□ -1.64
RFC4P35249 RN7SKP57-201ENST00000517248 293 ntBASIC4.82□□□□□ -1.64
RFC4P35249 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.82□□□□□ -1.64
RFC4P35249 NPM1P35-201ENST00000533043 868 ntBASIC4.82□□□□□ -1.64
RFC4P35249 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFC4P35249 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFC4P35249 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFC4P35249 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.82□□□□□ -1.64
RFC4P35249 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.82□□□□□ -1.64
RFC4P35249 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.82□□□□□ -1.64
RFC4P35249 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.82□□□□□ -1.64
RFC4P35249 AC010591.1-201ENST00000603941 649 ntBASIC4.82□□□□□ -1.64
RFC4P35249 AP005212.4-201ENST00000614206 710 ntBASIC4.82□□□□□ -1.64
RFC4P35249 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.82□□□□□ -1.64
RFC4P35249 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFC4P35249 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFC4P35249 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RFC4P35249 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms