Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC12P31275 AP003396.4-201ENST00000527574 265 ntBASIC5.43□□□□□ -1.54
HOXC12P31275 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.43□□□□□ -1.54
HOXC12P31275 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC12P31275 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC12P31275 MIR4504-201ENST00000577413 92 ntBASIC5.43□□□□□ -1.54
HOXC12P31275 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC12P31275 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC12P31275 AC008277.2-201ENST00000605196 797 ntBASIC5.43□□□□□ -1.54
HOXC12P31275 RNU6-87P-201ENST00000607561 108 ntBASIC5.43□□□□□ -1.54
HOXC12P31275 AL161734.1-201ENST00000609720 557 ntBASIC5.43□□□□□ -1.54
HOXC12P31275 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC12P31275 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC12P31275 MIR6826-201ENST00000617808 98 ntBASIC5.43□□□□□ -1.54
HOXC12P31275 AC068722.2-201ENST00000618734 544 ntBASIC5.43□□□□□ -1.54
HOXC12P31275 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXC12P31275 AC116667.2-201ENST00000641075 823 ntBASIC5.43□□□□□ -1.54
HOXC12P31275 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC12P31275 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC12P31275 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC12P31275 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXC12P31275 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC12P31275 AC112243.1-201ENST00000623949 3851 ntBASIC5.43□□□□□ -1.54
HOXC12P31275 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC12P31275 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC12P31275 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXC12P31275 HSPA8P14-201ENST00000552265 1805 ntBASIC5.43□□□□□ -1.54
HOXC12P31275 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HOXC12P31275 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC12P31275 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HOXC12P31275 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC12P31275 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC12P31275 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HOXC12P31275 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC12P31275 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC12P31275 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC12P31275 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC12P31275 AC016583.1-201ENST00000624221 2431 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC12P31275 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HOXC12P31275 Y_RNA.1-201ENST00000352915 104 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 RNU4-44P-201ENST00000363050 141 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 MIR130B-202ENST00000385018 82 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HOXC12P31275 RN7SKP161-201ENST00000411110 305 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC12P31275 RPL6P29-201ENST00000414863 865 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC12P31275 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC12P31275 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC12P31275 AC002486.1-201ENST00000435098 391 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 H3F3BP1-201ENST00000440551 403 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 RPS26P56-201ENST00000444468 240 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC12P31275 AC002553.3-201ENST00000453002 341 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 PPIAP7-201ENST00000454070 489 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 C1DP4-201ENST00000455429 424 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC12P31275 TRBV26-201ENST00000456572 344 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC12P31275 PABPC1P3-201ENST00000469174 459 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AC006539.1-201ENST00000481419 501 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AC124945.1-201ENST00000485133 188 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AC007182.2-201ENST00000489251 402 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 RN7SL629P-201ENST00000489622 285 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.42□□□□□ -1.54
HOXC12P31275 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.42□□□□□ -1.54
HOXC12P31275 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.42□□□□□ -1.54
HOXC12P31275 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC12P31275 OR5M14P-201ENST00000506803 618 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC12P31275 Y_RNA.672-201ENST00000516289 104 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 Y_RNA.704-201ENST00000516851 102 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC12P31275 AP000620.1-201ENST00000527147 504 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AP003181.2-201ENST00000528941 181 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AP001858.2-201ENST00000536213 601 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC12P31275 AC007956.1-201ENST00000555623 542 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC12P31275 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC12P31275 MIR4301-201ENST00000577203 66 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 MIR4719-201ENST00000585233 84 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC12P31275 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC12P31275 LRRC77P-213ENST00000637727 880 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HOXC12P31275 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC12P31275 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC12P31275 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC12P31275 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HOXC12P31275 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC12P31275 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC12P31275 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HOXC12P31275 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
HOXC12P31275 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC12P31275 KYNUP3-201ENST00000574386 1341 ntBASIC5.42□□□□□ -1.54
HOXC12P31275 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
HOXC12P31275 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms