Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HOXA11P31270 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXA11P31270 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
HOXA11P31270 AC091178.1-203ENST00000584586 279 ntBASIC4.82□□□□□ -1.64
HOXA11P31270 VN1R84P-201ENST00000593697 235 ntBASIC4.82□□□□□ -1.64
HOXA11P31270 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.82□□□□□ -1.64
HOXA11P31270 AC015726.1-201ENST00000602353 681 ntBASIC4.82□□□□□ -1.64
HOXA11P31270 AC025165.5-201ENST00000602802 578 ntBASIC4.82□□□□□ -1.64
HOXA11P31270 AC245100.7-201ENST00000609678 442 ntBASIC4.82□□□□□ -1.64
HOXA11P31270 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXA11P31270 AC078883.4-201ENST00000623218 367 ntBASIC4.82□□□□□ -1.64
HOXA11P31270 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXA11P31270 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA11P31270 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA11P31270 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HOXA11P31270 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXA11P31270 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HOXA11P31270 AL731566.1-201ENST00000620490 1937 ntBASIC4.82□□□□□ -1.64
HOXA11P31270 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HOXA11P31270 AL672167.1-205ENST00000641112 3080 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 AC026523.2-201ENST00000625039 7739 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HOXA11P31270 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HOXA11P31270 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXA11P31270 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HOXA11P31270 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXA11P31270 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
HOXA11P31270 RNU6-236P-201ENST00000363886 106 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 RNU6-244P-201ENST00000391028 104 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXA11P31270 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HOXA11P31270 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 CTSL3P-202ENST00000412179 788 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 RPL23AP26-201ENST00000412728 464 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 NRBF2P2-201ENST00000413087 861 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXA11P31270 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXA11P31270 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXA11P31270 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXA11P31270 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXA11P31270 RPL23AP52-201ENST00000439311 478 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 ACTR3P2-201ENST00000439585 1257 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXA11P31270 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXA11P31270 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXA11P31270 FTH1P2-201ENST00000466086 412 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 AC010683.1-201ENST00000473673 378 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXA11P31270 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXA11P31270 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXA11P31270 AC093752.1-206ENST00000511823 336 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 RNU6-1028P-201ENST00000517164 93 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.81□□□□□ -1.64
HOXA11P31270 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HOXA11P31270 MTCO2P15-201ENST00000532655 656 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.81□□□□□ -1.64
HOXA11P31270 AL049870.4-201ENST00000555741 486 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 AC025884.1-201ENST00000556034 378 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 MTND4P33-201ENST00000556706 766 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXA11P31270 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXA11P31270 AC109446.2-201ENST00000567872 497 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXA11P31270 AL035411.2-201ENST00000604022 421 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 ARF4P1-201ENST00000605447 541 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 AC091979.2-201ENST00000607514 214 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 AP002360.3-201ENST00000607673 710 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HOXA11P31270 MIR3653-201ENST00000625572 110 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.81□□□□□ -1.64
HOXA11P31270 AC090897.3-201ENST00000636973 1157 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HOXA11P31270 BX649567.1-201ENST00000642071 1134 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXA11P31270 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXA11P31270 AC074029.4-201ENST00000624796 1859 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXA11P31270 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXA11P31270 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXA11P31270 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXA11P31270 LINC01109-201ENST00000603837 3081 ntBASIC4.81□□□□□ -1.64
HOXA11P31270 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXA11P31270 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXA11P31270 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXA11P31270 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 A2MP1-204ENST00000566278 4130 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA11P31270 OR5H2-201ENST00000355273 945 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXA11P31270 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXA11P31270 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXA11P31270 RNU4-31P-201ENST00000384211 141 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 HMGB1P10-201ENST00000395823 563 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 RPL31P52-201ENST00000407532 367 ntBASIC4.8□□□□□ -1.64
HOXA11P31270 RNU2-17P-201ENST00000410290 190 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms