Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.79□□□□□ -1.8
GDF1P27539 AC100770.1-201ENST00000532310 322 ntBASIC3.79□□□□□ -1.8
GDF1P27539 AC068339.2-201ENST00000534395 618 ntBASIC3.79□□□□□ -1.8
GDF1P27539 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.79□□□□□ -1.8
GDF1P27539 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.79□□□□□ -1.8
GDF1P27539 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.79□□□□□ -1.8
GDF1P27539 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.79□□□□□ -1.8
GDF1P27539 AC104229.1-201ENST00000561364 255 ntBASIC3.79□□□□□ -1.8
GDF1P27539 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.79□□□□□ -1.8
GDF1P27539 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.79□□□□□ -1.8
GDF1P27539 RN7SL600P-201ENST00000581811 299 ntBASIC3.79□□□□□ -1.8
GDF1P27539 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.79□□□□□ -1.8
GDF1P27539 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.79□□□□□ -1.8
GDF1P27539 OR6R2P-201ENST00000609216 300 ntBASIC3.79□□□□□ -1.8
GDF1P27539 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.79□□□□□ -1.8
GDF1P27539 AC015813.4-201ENST00000610469 179 ntBASIC3.79□□□□□ -1.8
GDF1P27539 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.79□□□□□ -1.8
GDF1P27539 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.79□□□□□ -1.8
GDF1P27539 AP000943.4-201ENST00000622912 357 ntBASIC3.79□□□□□ -1.8
GDF1P27539 AL356121.2-201ENST00000624715 780 ntBASIC3.79□□□□□ -1.8
GDF1P27539 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GDF1P27539 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GDF1P27539 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.79□□□□□ -1.8
GDF1P27539 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GDF1P27539 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GDF1P27539 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
GDF1P27539 PNPT1P2-201ENST00000456768 2050 ntBASIC3.79□□□□□ -1.8
GDF1P27539 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GDF1P27539 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GDF1P27539 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.78□□□□□ -1.8
GDF1P27539 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GDF1P27539 OR11H5P-202ENST00000641612 1325 ntBASIC3.78□□□□□ -1.8
GDF1P27539 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.78□□□□□ -1.8
GDF1P27539 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
GDF1P27539 AC022893.2-201ENST00000564832 3296 ntBASIC3.78□□□□□ -1.8
GDF1P27539 OR11H4-201ENST00000315409 1082 ntBASIC3.78□□□□□ -1.8
GDF1P27539 RNA5SP130-201ENST00000364431 114 ntBASIC3.78□□□□□ -1.8
GDF1P27539 ENSAP1-201ENST00000392855 326 ntBASIC3.78□□□□□ -1.8
GDF1P27539 AL034374.1-201ENST00000406329 351 ntBASIC3.78□□□□□ -1.8
GDF1P27539 RNU2-17P-201ENST00000410290 190 ntBASIC3.78□□□□□ -1.8
GDF1P27539 TATDN1P1-201ENST00000414123 891 ntBASIC3.78□□□□□ -1.8
GDF1P27539 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.78□□□□□ -1.8
GDF1P27539 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GDF1P27539 RPL17P36-201ENST00000420302 549 ntBASIC3.78□□□□□ -1.8
GDF1P27539 AC004448.2-201ENST00000422360 586 ntBASIC3.78□□□□□ -1.8
GDF1P27539 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.78□□□□□ -1.8
GDF1P27539 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.78□□□□□ -1.8
GDF1P27539 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.78□□□□□ -1.8
GDF1P27539 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.78□□□□□ -1.8
GDF1P27539 GXYLT1P1-201ENST00000446657 490 ntBASIC3.78□□□□□ -1.8
GDF1P27539 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GDF1P27539 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
GDF1P27539 RPS6P4-201ENST00000494693 758 ntBASIC3.78□□□□□ -1.8
GDF1P27539 NAMPTP2-201ENST00000505629 1115 ntBASIC3.78□□□□□ -1.8
GDF1P27539 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.78□□□□□ -1.8
GDF1P27539 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.78□□□□□ -1.8
GDF1P27539 MTCO3P27-201ENST00000514397 196 ntBASIC3.78□□□□□ -1.8
GDF1P27539 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.78□□□□□ -1.8
GDF1P27539 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.78□□□□□ -1.8
GDF1P27539 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.78□□□□□ -1.8
GDF1P27539 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.78□□□□□ -1.8
GDF1P27539 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GDF1P27539 AC068714.1-201ENST00000559623 800 ntBASIC3.78□□□□□ -1.8
GDF1P27539 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.78□□□□□ -1.8
GDF1P27539 AC104072.1-201ENST00000568817 668 ntBASIC3.78□□□□□ -1.8
GDF1P27539 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.78□□□□□ -1.8
GDF1P27539 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.78□□□□□ -1.8
GDF1P27539 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.78□□□□□ -1.8
GDF1P27539 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.78□□□□□ -1.8
GDF1P27539 BNIP3P27-201ENST00000599991 412 ntBASIC3.78□□□□□ -1.8
GDF1P27539 VN1R85P-201ENST00000601587 426 ntBASIC3.78□□□□□ -1.8
GDF1P27539 MTATP6P2-201ENST00000603319 678 ntBASIC3.78□□□□□ -1.8
GDF1P27539 AL139286.1-201ENST00000604465 483 ntBASIC3.78□□□□□ -1.8
GDF1P27539 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.78□□□□□ -1.8
GDF1P27539 AC010857.1-201ENST00000606398 594 ntBASIC3.78□□□□□ -1.8
GDF1P27539 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GDF1P27539 AC000123.2-201ENST00000623124 461 ntBASIC3.78□□□□□ -1.8
GDF1P27539 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.78□□□□□ -1.8
GDF1P27539 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GDF1P27539 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.78□□□□□ -1.8
GDF1P27539 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
GDF1P27539 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GDF1P27539 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GDF1P27539 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.78□□□□□ -1.8
GDF1P27539 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GDF1P27539 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.78□□□□□ -1.8
GDF1P27539 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GDF1P27539 AC092162.3-201ENST00000624511 1624 ntBASIC3.77□□□□□ -1.81
GDF1P27539 MTND5P11-201ENST00000511037 1812 ntBASIC3.77□□□□□ -1.81
GDF1P27539 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
GDF1P27539 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GDF1P27539 MIR16-2-201ENST00000362117 81 ntBASIC3.77□□□□□ -1.81
GDF1P27539 RNU6-532P-201ENST00000384318 107 ntBASIC3.77□□□□□ -1.81
GDF1P27539 RNA5SP372-201ENST00000390836 115 ntBASIC3.77□□□□□ -1.81
GDF1P27539 SNORA57.1-201ENST00000391227 145 ntBASIC3.77□□□□□ -1.81
GDF1P27539 HMGB1P10-201ENST00000395823 563 ntBASIC3.77□□□□□ -1.81
GDF1P27539 RPL21P65-201ENST00000406094 466 ntBASIC3.77□□□□□ -1.81
GDF1P27539 BX664727.1-201ENST00000416024 466 ntBASIC3.77□□□□□ -1.81
GDF1P27539 AL356095.1-201ENST00000417217 199 ntBASIC3.77□□□□□ -1.81
GDF1P27539 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms