Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.22□□□□□ -1.89
COL8A2P25067 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL8A2P25067 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
COL8A2P25067 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.22□□□□□ -1.89
COL8A2P25067 Y_RNA.62-201ENST00000362840 99 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.22□□□□□ -1.89
COL8A2P25067 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.22□□□□□ -1.89
COL8A2P25067 RNA5SP105-201ENST00000391123 113 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 NCSTNP1-201ENST00000406229 144 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.22□□□□□ -1.89
COL8A2P25067 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL8A2P25067 AC009302.1-201ENST00000417147 390 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 AC092647.1-201ENST00000420654 287 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.22□□□□□ -1.89
COL8A2P25067 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.22□□□□□ -1.89
COL8A2P25067 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.22□□□□□ -1.89
COL8A2P25067 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.22□□□□□ -1.89
COL8A2P25067 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
COL8A2P25067 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.22□□□□□ -1.89
COL8A2P25067 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.22□□□□□ -1.89
COL8A2P25067 CDH12P2-201ENST00000504393 298 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 SNORD116-30-201ENST00000516468 85 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 RNA5SP143-201ENST00000516936 115 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.22□□□□□ -1.89
COL8A2P25067 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.22□□□□□ -1.89
COL8A2P25067 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL8A2P25067 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.22□□□□□ -1.89
COL8A2P25067 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.22□□□□□ -1.89
COL8A2P25067 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.22□□□□□ -1.89
COL8A2P25067 BNIP3P33-201ENST00000598912 569 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.22□□□□□ -1.89
COL8A2P25067 GMCL1P2-201ENST00000605230 823 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 AC005972.3-201ENST00000606304 481 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 AL391497.1-201ENST00000608671 547 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.22□□□□□ -1.89
COL8A2P25067 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.22□□□□□ -1.89
COL8A2P25067 AC015722.2-201ENST00000622210 551 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.22□□□□□ -1.89
COL8A2P25067 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.22□□□□□ -1.89
COL8A2P25067 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.22□□□□□ -1.89
COL8A2P25067 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
COL8A2P25067 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
COL8A2P25067 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL8A2P25067 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL8A2P25067 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL8A2P25067 AC024560.2-201ENST00000507981 1497 ntBASIC3.22□□□□□ -1.89
COL8A2P25067 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL8A2P25067 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
COL8A2P25067 LINC02471-203ENST00000641941 4752 ntBASIC3.21□□□□□ -1.89
COL8A2P25067 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.21□□□□□ -1.89
COL8A2P25067 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL8A2P25067 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.21□□□□□ -1.9
COL8A2P25067 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL8A2P25067 AL031985.3-201ENST00000565390 2449 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.21□□□□□ -1.9
COL8A2P25067 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL8A2P25067 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL8A2P25067 MIR199A2-201ENST00000385289 110 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
COL8A2P25067 AL136131.1-201ENST00000406079 803 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 AC022022.1-201ENST00000430304 178 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 RPL37P1-201ENST00000432310 284 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 RPS6P12-201ENST00000432491 726 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.21□□□□□ -1.9
COL8A2P25067 RPL7P28-201ENST00000437739 740 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 AP000936.3-201ENST00000438127 255 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 TPTE2P3-201ENST00000441562 1189 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.21□□□□□ -1.9
COL8A2P25067 RPS17P13-201ENST00000448974 407 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.21□□□□□ -1.9
COL8A2P25067 OR6C72P-201ENST00000451403 892 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 OR7L1P-201ENST00000456181 380 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 UBDP1-202ENST00000457888 382 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 EIF2S2P4-201ENST00000461070 984 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 AL133162.1-201ENST00000463228 453 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.21□□□□□ -1.9
COL8A2P25067 AC105918.1-201ENST00000474399 838 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 AC108941.1-201ENST00000502853 530 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.21□□□□□ -1.9
COL8A2P25067 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
COL8A2P25067 AC026726.1-201ENST00000512859 601 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.21□□□□□ -1.9
COL8A2P25067 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.21□□□□□ -1.9
COL8A2P25067 AC109635.6-201ENST00000525487 1113 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.21□□□□□ -1.9
COL8A2P25067 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.21□□□□□ -1.9
COL8A2P25067 AL360157.1-201ENST00000565962 87 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.21□□□□□ -1.9
COL8A2P25067 MTATP6P25-201ENST00000574491 261 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.21□□□□□ -1.9
COL8A2P25067 AC053481.3-201ENST00000577881 843 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.21□□□□□ -1.9
COL8A2P25067 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.21□□□□□ -1.9
COL8A2P25067 AC244505.7-201ENST00000599675 272 ntBASIC3.21□□□□□ -1.9
COL8A2P25067 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.21□□□□□ -1.9
COL8A2P25067 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.21□□□□□ -1.9
COL8A2P25067 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.21□□□□□ -1.9
COL8A2P25067 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
COL8A2P25067 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms