Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC010680.3-201ENST00000604215 520 ntBASIC6.8□□□□□ -1.32
RFX1P22670 AC006924.1-201ENST00000610750 559 ntBASIC6.8□□□□□ -1.32
RFX1P22670 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.8□□□□□ -1.32
RFX1P22670 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 AC109309.2-201ENST00000612597 332 ntBASIC6.8□□□□□ -1.32
RFX1P22670 AC093648.1-201ENST00000623546 606 ntBASIC6.8□□□□□ -1.32
RFX1P22670 AC116667.2-201ENST00000641075 823 ntBASIC6.8□□□□□ -1.32
RFX1P22670 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.8□□□□□ -1.32
RFX1P22670 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
RFX1P22670 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFX1P22670 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFX1P22670 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFX1P22670 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RFX1P22670 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
RFX1P22670 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFX1P22670 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFX1P22670 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RFX1P22670 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFX1P22670 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RFX1P22670 RNU6-1120P-201ENST00000362988 108 ntBASIC6.79□□□□□ -1.32
RFX1P22670 RNA5SP391-201ENST00000363456 119 ntBASIC6.79□□□□□ -1.32
RFX1P22670 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
RFX1P22670 RNU1-74P-201ENST00000384108 171 ntBASIC6.79□□□□□ -1.32
RFX1P22670 RPL31P1-201ENST00000398116 372 ntBASIC6.79□□□□□ -1.32
RFX1P22670 AC069218.2-201ENST00000411665 344 ntBASIC6.79□□□□□ -1.32
RFX1P22670 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.79□□□□□ -1.32
RFX1P22670 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.79□□□□□ -1.32
RFX1P22670 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.79□□□□□ -1.32
RFX1P22670 USP9YP9-201ENST00000429406 715 ntBASIC6.79□□□□□ -1.32
RFX1P22670 AL590233.1-201ENST00000430017 456 ntBASIC6.79□□□□□ -1.32
RFX1P22670 GTF2IP20-201ENST00000431663 360 ntBASIC6.79□□□□□ -1.32
RFX1P22670 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.79□□□□□ -1.32
RFX1P22670 AL596266.1-201ENST00000448132 400 ntBASIC6.79□□□□□ -1.32
RFX1P22670 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC6.79□□□□□ -1.32
RFX1P22670 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.79□□□□□ -1.32
RFX1P22670 ATP5LP5-201ENST00000483050 299 ntBASIC6.79□□□□□ -1.32
RFX1P22670 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.79□□□□□ -1.32
RFX1P22670 GM2AP2-201ENST00000491764 562 ntBASIC6.79□□□□□ -1.32
RFX1P22670 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.79□□□□□ -1.32
RFX1P22670 AC010587.1-201ENST00000505809 469 ntBASIC6.79□□□□□ -1.32
RFX1P22670 NPM1P41-201ENST00000512920 831 ntBASIC6.79□□□□□ -1.32
RFX1P22670 ZNF519P4-201ENST00000514008 125 ntBASIC6.79□□□□□ -1.32
RFX1P22670 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.79□□□□□ -1.32
RFX1P22670 OR5AL2P-201ENST00000532185 920 ntBASIC6.79□□□□□ -1.32
RFX1P22670 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.79□□□□□ -1.32
RFX1P22670 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RFX1P22670 AC090651.1-201ENST00000567865 634 ntBASIC6.79□□□□□ -1.32
RFX1P22670 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.79□□□□□ -1.32
RFX1P22670 Z95327.3-201ENST00000610385 572 ntBASIC6.79□□□□□ -1.32
RFX1P22670 AC006504.8-201ENST00000621046 635 ntBASIC6.79□□□□□ -1.32
RFX1P22670 AC000123.2-201ENST00000623124 461 ntBASIC6.79□□□□□ -1.32
RFX1P22670 AC091953.2-201ENST00000623979 160 ntBASIC6.79□□□□□ -1.32
RFX1P22670 AP000550.3-201ENST00000637734 379 ntBASIC6.79□□□□□ -1.32
RFX1P22670 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.79□□□□□ -1.32
RFX1P22670 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RFX1P22670 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFX1P22670 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFX1P22670 AP000756.2-201ENST00000624168 2567 ntBASIC6.79□□□□□ -1.32
RFX1P22670 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
RFX1P22670 CKAP2P1-201ENST00000555477 2049 ntBASIC6.79□□□□□ -1.32
RFX1P22670 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFX1P22670 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.79□□□□□ -1.32
RFX1P22670 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.79□□□□□ -1.32
RFX1P22670 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFX1P22670 MTND5P33-201ENST00000571250 1450 ntBASIC6.79□□□□□ -1.32
RFX1P22670 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.78□□□□□ -1.32
RFX1P22670 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.78□□□□□ -1.32
RFX1P22670 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.78□□□□□ -1.32
RFX1P22670 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
RFX1P22670 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RFX1P22670 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RFX1P22670 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.78□□□□□ -1.32
RFX1P22670 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.78□□□□□ -1.32
RFX1P22670 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.78□□□□□ -1.32
RFX1P22670 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RFX1P22670 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC6.78□□□□□ -1.32
RFX1P22670 Y_RNA.72-201ENST00000362894 103 ntBASIC6.78□□□□□ -1.32
RFX1P22670 RNU6-1243P-201ENST00000364028 107 ntBASIC6.78□□□□□ -1.32
RFX1P22670 SNORA17A-201ENST00000391185 133 ntBASIC6.78□□□□□ -1.32
RFX1P22670 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC6.78□□□□□ -1.32
RFX1P22670 AC007562.1-201ENST00000421819 517 ntBASIC6.78□□□□□ -1.32
RFX1P22670 EIF1P3-201ENST00000423841 334 ntBASIC6.78□□□□□ -1.32
RFX1P22670 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.78□□□□□ -1.32
RFX1P22670 SEPT14P3-201ENST00000439401 183 ntBASIC6.78□□□□□ -1.32
RFX1P22670 AC023274.2-201ENST00000445264 521 ntBASIC6.78□□□□□ -1.32
RFX1P22670 AL732372.2-207ENST00000445840 183 ntBASIC6.78□□□□□ -1.32
RFX1P22670 FDX1P2-201ENST00000450769 375 ntBASIC6.78□□□□□ -1.32
RFX1P22670 SEPT14P2-201ENST00000453405 183 ntBASIC6.78□□□□□ -1.32
RFX1P22670 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.78□□□□□ -1.32
RFX1P22670 RN7SL369P-201ENST00000477138 299 ntBASIC6.78□□□□□ -1.32
RFX1P22670 RN7SL326P-201ENST00000477493 296 ntBASIC6.78□□□□□ -1.32
RFX1P22670 RPL23AP72-201ENST00000492447 435 ntBASIC6.78□□□□□ -1.32
RFX1P22670 KHDC1P1-201ENST00000511053 508 ntBASIC6.78□□□□□ -1.32
RFX1P22670 SEPT14P4-201ENST00000513445 186 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms