Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 SNORD56.4-201ENST00000363883 71 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 SNORD66.1-201ENST00000391230 76 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 BTBD10P2-201ENST00000404779 676 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 RPS23P10-201ENST00000416185 486 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 CYCSP10-201ENST00000417973 294 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AC016712.1-201ENST00000431088 378 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 PRELID3BP10-201ENST00000431957 584 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AL512326.1-201ENST00000443050 721 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AC009963.2-201ENST00000453431 138 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AC133473.1-201ENST00000455173 299 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 RPL7P22-201ENST00000466005 733 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AC093840.1-201ENST00000511599 336 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AC010476.1-201ENST00000519111 851 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 OR8L1P-201ENST00000534005 955 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AC006064.5-201ENST00000541782 248 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AL109766.1-201ENST00000555080 552 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AC068831.4-201ENST00000556118 109 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AC079148.1-201ENST00000565944 819 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AL121834.1-201ENST00000572284 509 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AL139286.1-201ENST00000604465 483 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 RNA5SP108-201ENST00000605921 117 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AC245100.7-201ENST00000609678 442 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AC121761.2-201ENST00000617300 689 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 MIR7154-201ENST00000620673 73 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AC132825.7-201ENST00000638744 335 ntBASIC4.35□□□□□ -1.71
HLA-DPA1P20036 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DPA1P20036 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 MIR16-2-201ENST00000362117 81 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 U3.22-201ENST00000391120 215 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AL158050.1-201ENST00000416077 457 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AC008173.1-201ENST00000418901 264 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 PSMA2P3-201ENST00000429685 675 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 RPL23AP52-201ENST00000439311 478 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AC104164.2-201ENST00000496953 495 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AL592156.1-201ENST00000508758 304 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 HPRT1P1-201ENST00000509498 657 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AC092593.2-201ENST00000513866 913 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AL354984.3-201ENST00000604803 325 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AC004825.2-201ENST00000616634 455 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 C2orf27A-204ENST00000623058 969 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 MTND4P8-201ENST00000514997 1362 ntBASIC4.34□□□□□ -1.71
HLA-DPA1P20036 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DPA1P20036 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
HLA-DPA1P20036 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.34□□□□□ -1.72
HLA-DPA1P20036 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.34□□□□□ -1.72
HLA-DPA1P20036 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DPA1P20036 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DPA1P20036 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DPA1P20036 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DPA1P20036 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DPA1P20036 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DPA1P20036 RNU1-108P-201ENST00000362556 161 ntBASIC4.33□□□□□ -1.72
HLA-DPA1P20036 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HLA-DPA1P20036 MIR525-201ENST00000384978 85 ntBASIC4.33□□□□□ -1.72
HLA-DPA1P20036 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HLA-DPA1P20036 AL161631.1-201ENST00000417933 486 ntBASIC4.33□□□□□ -1.72
HLA-DPA1P20036 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DPA1P20036 AC234779.1-201ENST00000425910 285 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms