Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NFKB1P19838 SNX18P3-202ENST00000565670 1750 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 RN7SKP184-201ENST00000362348 333 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 RNU4-1-201ENST00000363925 141 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NFKB1P19838 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NFKB1P19838 RNU2-39P-201ENST00000410604 198 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 AC245054.2-201ENST00000415639 319 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NFKB1P19838 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.27□□□□□ -1.41
NFKB1P19838 BEND7P1-201ENST00000422058 457 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 AL358176.2-201ENST00000425769 204 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 AL354707.3-201ENST00000427308 331 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 LYPLA1P1-201ENST00000434514 622 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.27□□□□□ -1.41
NFKB1P19838 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.27□□□□□ -1.41
NFKB1P19838 RNU7-63P-201ENST00000459054 62 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 RN7SL552P-201ENST00000462094 276 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 HMGN2P26-201ENST00000463169 339 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 RPL31P50-201ENST00000471002 296 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 RPL7P6-201ENST00000480903 738 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 RPS4XP18-201ENST00000495480 763 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 RPS26P24-201ENST00000497656 331 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 AC010587.1-201ENST00000505809 469 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NFKB1P19838 RNU6-714P-201ENST00000516963 103 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.27□□□□□ -1.41
NFKB1P19838 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.27□□□□□ -1.41
NFKB1P19838 AC123904.2-201ENST00000548059 300 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 SULT1C2P1-202ENST00000562418 459 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 MT1CP-201ENST00000567054 174 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 AL078601.3-201ENST00000573303 535 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.27□□□□□ -1.41
NFKB1P19838 AC100830.2-201ENST00000581636 240 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.27□□□□□ -1.41
NFKB1P19838 AC008555.7-201ENST00000605008 583 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 AL080274.1-201ENST00000605565 220 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 AL352984.2-201ENST00000611153 546 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 AC037198.3-201ENST00000616754 526 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NFKB1P19838 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
NFKB1P19838 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.27□□□□□ -1.41
NFKB1P19838 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
NFKB1P19838 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NFKB1P19838 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
NFKB1P19838 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
NFKB1P19838 AC007823.1-201ENST00000569932 1566 ntBASIC6.27□□□□□ -1.41
NFKB1P19838 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.27□□□□□ -1.41
NFKB1P19838 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
NFKB1P19838 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.26□□□□□ -1.41
NFKB1P19838 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NFKB1P19838 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
NFKB1P19838 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
NFKB1P19838 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NFKB1P19838 AC011416.1-201ENST00000514947 1732 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 AL662795.2-201ENST00000624252 3706 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.26□□□□□ -1.41
NFKB1P19838 RPL23AP57-201ENST00000332361 466 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 RNU6-1097P-201ENST00000363586 107 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 AL451142.1-201ENST00000375867 775 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 Y_RNA.445-201ENST00000384168 102 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NFKB1P19838 RNA5SP198-201ENST00000410376 127 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.26□□□□□ -1.41
NFKB1P19838 TPMTP2-201ENST00000414372 726 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.26□□□□□ -1.41
NFKB1P19838 AC015977.1-201ENST00000418887 292 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.26□□□□□ -1.41
NFKB1P19838 FAM103A2P-201ENST00000444122 354 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NFKB1P19838 AC004980.3-201ENST00000447046 365 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 RPL37P3-201ENST00000456825 293 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 RPS15AP1-201ENST00000457423 391 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 SLC25A51P1-201ENST00000468432 871 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 MTND4P17-201ENST00000470444 350 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 AC078785.3-201ENST00000476607 425 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.26□□□□□ -1.41
NFKB1P19838 UBA52P3-201ENST00000491303 382 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 RN7SL612P-201ENST00000497704 295 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 TMEM251P1-201ENST00000503717 318 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.26□□□□□ -1.41
NFKB1P19838 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.26□□□□□ -1.41
NFKB1P19838 AC008945.1-201ENST00000505144 499 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 IGKV2-36-201ENST00000519999 223 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.26□□□□□ -1.41
NFKB1P19838 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NFKB1P19838 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NFKB1P19838 HSPE1P3-201ENST00000559254 309 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.26□□□□□ -1.41
NFKB1P19838 AC007494.1-201ENST00000562293 760 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 FRG2DP-202ENST00000566967 323 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NFKB1P19838 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.26□□□□□ -1.41
NFKB1P19838 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.26□□□□□ -1.41
NFKB1P19838 XIAPP1-201ENST00000603162 600 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 DPPA3P3-201ENST00000603842 430 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 Z84480.1-201ENST00000605131 311 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.26□□□□□ -1.41
NFKB1P19838 AL354950.2-201ENST00000617939 290 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms