Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CD44P16070 BTK-202ENST00000372880 2248 ntTSL 2 BASIC8.18□□□□□ -1.1
CD44P16070 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
CD44P16070 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.18□□□□□ -1.1
CD44P16070 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CD44P16070 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CD44P16070 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CD44P16070 SNORD73B-201ENST00000364394 72 ntBASIC8.18□□□□□ -1.1
CD44P16070 Y_RNA.234-201ENST00000364409 97 ntBASIC8.18□□□□□ -1.1
CD44P16070 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CD44P16070 RNU6-790P-201ENST00000384479 105 ntBASIC8.18□□□□□ -1.1
CD44P16070 CRIP1P3-201ENST00000416794 220 ntBASIC8.18□□□□□ -1.1
CD44P16070 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CD44P16070 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC8.18□□□□□ -1.1
CD44P16070 RPL23AP4-201ENST00000427757 463 ntBASIC8.18□□□□□ -1.1
CD44P16070 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC8.18□□□□□ -1.1
CD44P16070 AC010881.1-201ENST00000433830 235 ntBASIC8.18□□□□□ -1.1
CD44P16070 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC8.18□□□□□ -1.1
CD44P16070 AC016696.1-201ENST00000446949 318 ntBASIC8.18□□□□□ -1.1
CD44P16070 RPL23AP60-201ENST00000450011 454 ntBASIC8.18□□□□□ -1.1
CD44P16070 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC8.18□□□□□ -1.1
CD44P16070 AP000926.1-201ENST00000479573 241 ntBASIC8.18□□□□□ -1.1
CD44P16070 AC021382.1-201ENST00000483523 359 ntBASIC8.18□□□□□ -1.1
CD44P16070 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC8.18□□□□□ -1.1
CD44P16070 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC8.18□□□□□ -1.1
CD44P16070 AC005798.1-201ENST00000513715 387 ntBASIC8.18□□□□□ -1.1
CD44P16070 IGHVIII-47-1-201ENST00000518187 331 ntBASIC8.18□□□□□ -1.1
CD44P16070 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.18□□□□□ -1.1
CD44P16070 AL442163.3-201ENST00000554110 156 ntBASIC8.18□□□□□ -1.1
CD44P16070 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC8.18□□□□□ -1.1
CD44P16070 MIR4793-201ENST00000577502 87 ntBASIC8.18□□□□□ -1.1
CD44P16070 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC8.18□□□□□ -1.1
CD44P16070 AL158827.2-201ENST00000602494 330 ntBASIC8.18□□□□□ -1.1
CD44P16070 AC012443.1-201ENST00000605605 231 ntBASIC8.18□□□□□ -1.1
CD44P16070 AC009779.8-202ENST00000607990 932 ntBASIC8.18□□□□□ -1.1
CD44P16070 AC079456.1-201ENST00000624010 480 ntBASIC8.18□□□□□ -1.1
CD44P16070 AC243829.7-201ENST00000633081 225 ntBASIC8.18□□□□□ -1.1
CD44P16070 AL691447.3-201ENST00000635020 330 ntBASIC8.18□□□□□ -1.1
CD44P16070 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.18□□□□□ -1.1
CD44P16070 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.18□□□□□ -1.1
CD44P16070 CARF-203ENST00000414439 2099 ntTSL 2 BASIC8.18□□□□□ -1.1
CD44P16070 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.18□□□□□ -1.1
CD44P16070 AC138915.4-201ENST00000565549 4147 ntBASIC8.18□□□□□ -1.1
CD44P16070 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC8.17□□□□□ -1.1
CD44P16070 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CD44P16070 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CD44P16070 AL008638.3-201ENST00000623027 5182 ntBASIC8.17□□□□□ -1.1
CD44P16070 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC8.17□□□□□ -1.1
CD44P16070 AP003119.3-201ENST00000566747 4192 ntBASIC8.17□□□□□ -1.1
CD44P16070 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.17□□□□□ -1.1
CD44P16070 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC8.17□□□□□ -1.1
CD44P16070 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.17□□□□□ -1.1
CD44P16070 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CD44P16070 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CD44P16070 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CD44P16070 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CD44P16070 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CD44P16070 SNORA22-201ENST00000383907 134 ntBASIC8.17□□□□□ -1.1
CD44P16070 RNU6-937P-201ENST00000384325 106 ntBASIC8.17□□□□□ -1.1
CD44P16070 RNU6-476P-201ENST00000384726 107 ntBASIC8.17□□□□□ -1.1
CD44P16070 MED15P8-201ENST00000411601 545 ntBASIC8.17□□□□□ -1.1
CD44P16070 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.17□□□□□ -1.1
CD44P16070 RPSAP59-201ENST00000421048 890 ntBASIC8.17□□□□□ -1.1
CD44P16070 AC105052.2-201ENST00000434317 794 ntBASIC8.17□□□□□ -1.1
CD44P16070 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC8.17□□□□□ -1.1
CD44P16070 RAC1P7-201ENST00000445367 377 ntBASIC8.17□□□□□ -1.1
CD44P16070 DEFA11P-201ENST00000446470 261 ntBASIC8.17□□□□□ -1.1
CD44P16070 EEF1B2P7-201ENST00000451177 676 ntBASIC8.17□□□□□ -1.1
CD44P16070 FRG2FP-204ENST00000453982 852 ntBASIC8.17□□□□□ -1.1
CD44P16070 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.17□□□□□ -1.1
CD44P16070 RN7SL717P-201ENST00000478343 297 ntBASIC8.17□□□□□ -1.1
CD44P16070 UBA52P3-201ENST00000491303 382 ntBASIC8.17□□□□□ -1.1
CD44P16070 RN7SL608P-201ENST00000492377 279 ntBASIC8.17□□□□□ -1.1
CD44P16070 AC114801.1-201ENST00000512633 297 ntBASIC8.17□□□□□ -1.1
CD44P16070 DCAF13P2-201ENST00000514188 555 ntBASIC8.17□□□□□ -1.1
CD44P16070 LECT2-205ENST00000522943 574 ntTSL 3 BASIC8.17□□□□□ -1.1
CD44P16070 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC8.17□□□□□ -1.1
CD44P16070 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.17□□□□□ -1.1
CD44P16070 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC8.17□□□□□ -1.1
CD44P16070 AC120057.2-201ENST00000571520 271 ntBASIC8.17□□□□□ -1.1
CD44P16070 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC8.17□□□□□ -1.1
CD44P16070 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC8.17□□□□□ -1.1
CD44P16070 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.17□□□□□ -1.1
CD44P16070 DNAJC19P2-201ENST00000593340 302 ntBASIC8.17□□□□□ -1.1
CD44P16070 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC8.17□□□□□ -1.1
CD44P16070 RN7SL760P-201ENST00000607344 270 ntBASIC8.17□□□□□ -1.1
CD44P16070 AL590560.2-201ENST00000608430 732 ntBASIC8.17□□□□□ -1.1
CD44P16070 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC8.17□□□□□ -1.1
CD44P16070 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.17□□□□□ -1.1
CD44P16070 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CD44P16070 AL445487.1-201ENST00000415694 1580 ntBASIC8.17□□□□□ -1.1
CD44P16070 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.17□□□□□ -1.1
CD44P16070 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC8.17□□□□□ -1.1
CD44P16070 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CD44P16070 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC8.17□□□□□ -1.1
CD44P16070 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CD44P16070 OSBPL9P4-201ENST00000371707 1800 ntBASIC8.17□□□□□ -1.1
CD44P16070 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
CD44P16070 AL136981.1-203ENST00000451452 3844 ntBASIC8.17□□□□□ -1.1
CD44P16070 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms