Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.06□□□□□ -1.76
COL11A1P12107 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL11A1P12107 AC139713.2-215ENST00000641428 5037 ntBASIC4.06□□□□□ -1.76
COL11A1P12107 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.06□□□□□ -1.76
COL11A1P12107 AL121834.1-202ENST00000404494 277 ntBASIC4.06□□□□□ -1.76
COL11A1P12107 RNA5SP120-201ENST00000410900 112 ntBASIC4.06□□□□□ -1.76
COL11A1P12107 AC091862.1-201ENST00000438016 1100 ntBASIC4.06□□□□□ -1.76
COL11A1P12107 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.06□□□□□ -1.76
COL11A1P12107 AC017015.1-201ENST00000477387 286 ntBASIC4.06□□□□□ -1.76
COL11A1P12107 RPS26P15-201ENST00000488067 348 ntBASIC4.06□□□□□ -1.76
COL11A1P12107 AC010285.3-201ENST00000511668 676 ntBASIC4.06□□□□□ -1.76
COL11A1P12107 RN7SKP209-201ENST00000516888 304 ntBASIC4.06□□□□□ -1.76
COL11A1P12107 RN7SKP57-201ENST00000517248 293 ntBASIC4.06□□□□□ -1.76
COL11A1P12107 AP006245.1-201ENST00000522549 120 ntBASIC4.06□□□□□ -1.76
COL11A1P12107 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.06□□□□□ -1.76
COL11A1P12107 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.06□□□□□ -1.76
COL11A1P12107 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.06□□□□□ -1.76
COL11A1P12107 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.06□□□□□ -1.76
COL11A1P12107 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.06□□□□□ -1.76
COL11A1P12107 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
COL11A1P12107 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.06□□□□□ -1.76
COL11A1P12107 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL11A1P12107 AC090337.1-201ENST00000579651 2074 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 AL391219.1-201ENST00000422570 483 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.05□□□□□ -1.76
COL11A1P12107 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.05□□□□□ -1.76
COL11A1P12107 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL11A1P12107 RNU1-103P-201ENST00000516502 125 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 AC103843.2-201ENST00000530523 682 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.05□□□□□ -1.76
COL11A1P12107 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.05□□□□□ -1.76
COL11A1P12107 AC011816.2-201ENST00000607089 556 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 AC018690.1-201ENST00000608144 626 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL11A1P12107 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
COL11A1P12107 MAPK10-320ENST00000641462 6696 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 KPNA2P2-201ENST00000419546 1489 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 AL034403.1-201ENST00000399414 885 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL11A1P12107 OR5AW1P-201ENST00000426334 1006 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 YWHAEP5-201ENST00000431545 765 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL11A1P12107 RBMY2UP-201ENST00000453474 324 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.05□□□□□ -1.76
COL11A1P12107 AC097462.2-201ENST00000504623 481 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.05□□□□□ -1.76
COL11A1P12107 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.05□□□□□ -1.76
COL11A1P12107 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.05□□□□□ -1.76
COL11A1P12107 AC090136.1-201ENST00000520009 240 ntBASIC4.05□□□□□ -1.76
COL11A1P12107 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.05□□□□□ -1.76
COL11A1P12107 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.04□□□□□ -1.76
COL11A1P12107 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A1P12107 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A1P12107 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A1P12107 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A1P12107 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
COL11A1P12107 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A1P12107 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
COL11A1P12107 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A1P12107 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.04□□□□□ -1.76
COL11A1P12107 AC009229.4-201ENST00000623854 1947 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.04□□□□□ -1.76
COL11A1P12107 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.04□□□□□ -1.76
COL11A1P12107 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.04□□□□□ -1.76
COL11A1P12107 CBX1P3-201ENST00000413296 527 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A1P12107 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.04□□□□□ -1.76
COL11A1P12107 AL691447.1-201ENST00000419456 387 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 RPL21P109-201ENST00000422213 475 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.04□□□□□ -1.76
COL11A1P12107 HIGD1AP12-201ENST00000427832 281 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 AC005326.1-201ENST00000429197 123 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 MOB1AP1-201ENST00000430903 535 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 NDUFB1P1-201ENST00000435191 180 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 AL591363.1-201ENST00000450091 483 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 RPS3AP50-201ENST00000487064 803 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.04□□□□□ -1.76
COL11A1P12107 AC022882.1-201ENST00000532142 501 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.04□□□□□ -1.76
COL11A1P12107 MIR4325-201ENST00000583049 90 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.04□□□□□ -1.76
COL11A1P12107 MIR4276-201ENST00000584832 70 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 AC125494.3-201ENST00000602759 455 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 AC015813.4-201ENST00000610469 179 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 AC079298.2-201ENST00000623885 459 ntBASIC4.04□□□□□ -1.76
COL11A1P12107 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A1P12107 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.04□□□□□ -1.76
COL11A1P12107 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A1P12107 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A1P12107 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A1P12107 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL11A1P12107 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
COL11A1P12107 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
COL11A1P12107 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.03□□□□□ -1.76
COL11A1P12107 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.03□□□□□ -1.76
COL11A1P12107 NANOGP6-201ENST00000429190 847 ntBASIC4.03□□□□□ -1.76
COL11A1P12107 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms