Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AL358472.1-201ENST00000431295 329 ntBASIC3.16□□□□□ -1.9
CD28P10747 PRELID3BP10-201ENST00000431957 584 ntBASIC3.16□□□□□ -1.9
CD28P10747 MTCO1P52-201ENST00000433928 531 ntBASIC3.16□□□□□ -1.9
CD28P10747 GOT2P5-201ENST00000433995 546 ntBASIC3.16□□□□□ -1.9
CD28P10747 HLA-N-201ENST00000437516 135 ntBASIC3.16□□□□□ -1.9
CD28P10747 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.16□□□□□ -1.9
CD28P10747 VN1R34P-201ENST00000447387 883 ntBASIC3.16□□□□□ -1.9
CD28P10747 NDUFS5P3-201ENST00000450668 321 ntBASIC3.16□□□□□ -1.9
CD28P10747 HMGB1P26-201ENST00000452520 628 ntBASIC3.16□□□□□ -1.9
CD28P10747 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.16□□□□□ -1.9
CD28P10747 RPS26P3-201ENST00000470205 348 ntBASIC3.16□□□□□ -1.9
CD28P10747 AC007688.1-201ENST00000475592 759 ntBASIC3.16□□□□□ -1.9
CD28P10747 AC090543.2-201ENST00000483963 348 ntBASIC3.16□□□□□ -1.9
CD28P10747 AC004057.1-201ENST00000485827 348 ntBASIC3.16□□□□□ -1.9
CD28P10747 SUMO1P1-201ENST00000497904 306 ntBASIC3.16□□□□□ -1.9
CD28P10747 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.16□□□□□ -1.9
CD28P10747 VWA8P1-201ENST00000510889 176 ntBASIC3.16□□□□□ -1.9
CD28P10747 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.16□□□□□ -1.9
CD28P10747 HIGD1AP18-201ENST00000520730 278 ntBASIC3.16□□□□□ -1.9
CD28P10747 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.16□□□□□ -1.9
CD28P10747 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.16□□□□□ -1.9
CD28P10747 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.16□□□□□ -1.9
CD28P10747 NPM1P47-201ENST00000560843 856 ntBASIC3.16□□□□□ -1.9
CD28P10747 AC022884.3-201ENST00000579571 248 ntBASIC3.16□□□□□ -1.9
CD28P10747 MTCO3P22-201ENST00000603219 784 ntBASIC3.16□□□□□ -1.9
CD28P10747 AC123768.4-201ENST00000616244 701 ntBASIC3.16□□□□□ -1.9
CD28P10747 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.16□□□□□ -1.9
CD28P10747 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.16□□□□□ -1.9
CD28P10747 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.16□□□□□ -1.9
CD28P10747 AL354798.1-201ENST00000622505 329 ntBASIC3.16□□□□□ -1.9
CD28P10747 CR392039.5-201ENST00000623201 510 ntBASIC3.16□□□□□ -1.9
CD28P10747 AC104820.1-201ENST00000624183 307 ntBASIC3.16□□□□□ -1.9
CD28P10747 AL356121.2-201ENST00000624715 780 ntBASIC3.16□□□□□ -1.9
CD28P10747 OR5AC4P-202ENST00000642086 985 ntBASIC3.16□□□□□ -1.9
CD28P10747 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CD28P10747 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.16□□□□□ -1.9
CD28P10747 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CD28P10747 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
CD28P10747 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD28P10747 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CD28P10747 AL592437.2-201ENST00000421655 2434 ntBASIC3.15□□□□□ -1.9
CD28P10747 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.15□□□□□ -1.9
CD28P10747 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.9
CD28P10747 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.15□□□□□ -1.9
CD28P10747 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CD28P10747 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.15□□□□□ -1.91
CD28P10747 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CD28P10747 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.15□□□□□ -1.91
CD28P10747 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CD28P10747 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.15□□□□□ -1.91
CD28P10747 RNU6-185P-201ENST00000384421 107 ntBASIC3.15□□□□□ -1.91
CD28P10747 RNU6-146P-201ENST00000384602 108 ntBASIC3.15□□□□□ -1.91
CD28P10747 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CD28P10747 RNU6-244P-201ENST00000391028 104 ntBASIC3.15□□□□□ -1.91
CD28P10747 RNU4-74P-201ENST00000411280 161 ntBASIC3.15□□□□□ -1.91
CD28P10747 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.15□□□□□ -1.91
CD28P10747 SEC63P1-201ENST00000425785 1258 ntBASIC3.15□□□□□ -1.91
CD28P10747 AL451062.2-201ENST00000427515 271 ntBASIC3.15□□□□□ -1.91
CD28P10747 RPL23AP89-201ENST00000439324 255 ntBASIC3.15□□□□□ -1.91
CD28P10747 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.15□□□□□ -1.91
CD28P10747 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.15□□□□□ -1.91
CD28P10747 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.15□□□□□ -1.91
CD28P10747 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.15□□□□□ -1.91
CD28P10747 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.15□□□□□ -1.91
CD28P10747 RPS11P1-201ENST00000451072 473 ntBASIC3.15□□□□□ -1.91
CD28P10747 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.15□□□□□ -1.91
CD28P10747 RNU7-27P-201ENST00000459281 62 ntBASIC3.15□□□□□ -1.91
CD28P10747 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.15□□□□□ -1.91
CD28P10747 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.15□□□□□ -1.91
CD28P10747 HMGB1P47-201ENST00000511281 589 ntBASIC3.15□□□□□ -1.91
CD28P10747 RNA5SP143-201ENST00000516936 115 ntBASIC3.15□□□□□ -1.91
CD28P10747 RNU6-889P-201ENST00000517189 103 ntBASIC3.15□□□□□ -1.91
CD28P10747 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.15□□□□□ -1.91
CD28P10747 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.15□□□□□ -1.91
CD28P10747 AC069240.1-201ENST00000548774 375 ntBASIC3.15□□□□□ -1.91
CD28P10747 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CD28P10747 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.15□□□□□ -1.91
CD28P10747 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.15□□□□□ -1.91
CD28P10747 AL031666.3-201ENST00000609320 1006 ntBASIC3.15□□□□□ -1.91
CD28P10747 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.15□□□□□ -1.91
CD28P10747 AC243654.2-201ENST00000612843 443 ntBASIC3.15□□□□□ -1.91
CD28P10747 MIR7973-1-201ENST00000614683 76 ntBASIC3.15□□□□□ -1.91
CD28P10747 AC139769.3-201ENST00000618383 175 ntBASIC3.15□□□□□ -1.91
CD28P10747 AP006248.2-201ENST00000623309 592 ntBASIC3.15□□□□□ -1.91
CD28P10747 AC018529.3-201ENST00000624212 2254 ntBASIC3.15□□□□□ -1.91
CD28P10747 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CD28P10747 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CD28P10747 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.15□□□□□ -1.91
CD28P10747 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
CD28P10747 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
CD28P10747 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CD28P10747 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms