Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PHBP14-201ENST00000512887 367 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.81□□□□□ -1.64
COL5A2P05997 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL5A2P05997 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.81□□□□□ -1.64
COL5A2P05997 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.81□□□□□ -1.64
COL5A2P05997 AC009303.3-201ENST00000591103 736 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.81□□□□□ -1.64
COL5A2P05997 AC016911.1-201ENST00000613297 452 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.81□□□□□ -1.64
COL5A2P05997 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL5A2P05997 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL5A2P05997 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL5A2P05997 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL5A2P05997 AC027290.2-201ENST00000623210 18662 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL5A2P05997 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
COL5A2P05997 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL5A2P05997 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
COL5A2P05997 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL5A2P05997 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL5A2P05997 BMS1P3-201ENST00000372011 932 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 MIR1289-1-201ENST00000408836 144 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 AC236972.1-201ENST00000433225 199 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 RPS15AP29-201ENST00000445539 400 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.81□□□□□ -1.64
COL5A2P05997 AC073522.1-201ENST00000483312 377 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 RPL23AP94-201ENST00000512518 302 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.81□□□□□ -1.64
COL5A2P05997 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.81□□□□□ -1.64
COL5A2P05997 BX322635.1-201ENST00000605804 496 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 AC003001.2-201ENST00000616294 831 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 MIR6852-201ENST00000621699 66 ntBASIC4.81□□□□□ -1.64
COL5A2P05997 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.81□□□□□ -1.64
COL5A2P05997 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
COL5A2P05997 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL5A2P05997 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL5A2P05997 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL5A2P05997 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL5A2P05997 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL5A2P05997 AC093535.2-201ENST00000624769 2326 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL5A2P05997 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
COL5A2P05997 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL5A2P05997 BDP1P-201ENST00000582658 1990 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COL5A2P05997 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
COL5A2P05997 GNG5P1-201ENST00000255500 204 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COL5A2P05997 RNA5SP374-201ENST00000362939 125 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.8□□□□□ -1.64
COL5A2P05997 AC011742.1-201ENST00000431448 434 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 MTCO1P45-201ENST00000431457 267 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL5A2P05997 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.8□□□□□ -1.64
COL5A2P05997 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.8□□□□□ -1.64
COL5A2P05997 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.8□□□□□ -1.64
COL5A2P05997 AC067805.1-201ENST00000559344 470 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.8□□□□□ -1.64
COL5A2P05997 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL5A2P05997 AC125494.3-201ENST00000602759 455 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 AL390816.3-201ENST00000604527 1066 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL5A2P05997 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.8□□□□□ -1.64
COL5A2P05997 MIR7851-201ENST00000610611 160 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL5A2P05997 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL5A2P05997 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.8□□□□□ -1.64
COL5A2P05997 SCARNA15.3-201ENST00000626315 122 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 SCARNA4.1-201ENST00000628597 123 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 AL163152.1-201ENST00000642001 374 ntBASIC4.8□□□□□ -1.64
COL5A2P05997 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.8□□□□□ -1.64
COL5A2P05997 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.8□□□□□ -1.64
COL5A2P05997 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL5A2P05997 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL5A2P05997 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL5A2P05997 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.79□□□□□ -1.64
COL5A2P05997 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL5A2P05997 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL5A2P05997 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL5A2P05997 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL5A2P05997 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.79□□□□□ -1.64
COL5A2P05997 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL5A2P05997 AC120036.2-201ENST00000509729 1474 ntBASIC4.79□□□□□ -1.64
COL5A2P05997 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.79□□□□□ -1.64
COL5A2P05997 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL5A2P05997 SNORA38.1-201ENST00000364172 131 ntBASIC4.79□□□□□ -1.64
COL5A2P05997 AC083799.1-201ENST00000366451 910 ntBASIC4.79□□□□□ -1.64
COL5A2P05997 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COL5A2P05997 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL5A2P05997 RPF2P1-201ENST00000424137 906 ntBASIC4.79□□□□□ -1.64
COL5A2P05997 SETP10-201ENST00000424368 814 ntBASIC4.79□□□□□ -1.64
COL5A2P05997 RPL7P44-201ENST00000424827 742 ntBASIC4.79□□□□□ -1.64
COL5A2P05997 AC127537.2-201ENST00000439258 465 ntBASIC4.79□□□□□ -1.64
COL5A2P05997 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.79□□□□□ -1.64
COL5A2P05997 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.79□□□□□ -1.64
COL5A2P05997 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.79□□□□□ -1.64
COL5A2P05997 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.79□□□□□ -1.64
COL5A2P05997 RPL7P23-201ENST00000493874 747 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms