Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC2.18□□□□□ -2.06
APOBP04114 RNA5SP197-201ENST00000363357 119 ntBASIC2.18□□□□□ -2.06
APOBP04114 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC2.18□□□□□ -2.06
APOBP04114 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.18□□□□□ -2.06
APOBP04114 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC2.18□□□□□ -2.06
APOBP04114 AC099563.1-201ENST00000456086 418 ntBASIC2.18□□□□□ -2.06
APOBP04114 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.18□□□□□ -2.06
APOBP04114 AC008489.1-201ENST00000524271 483 ntBASIC2.18□□□□□ -2.06
APOBP04114 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC2.18□□□□□ -2.06
APOBP04114 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.18□□□□□ -2.06
APOBP04114 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC2.18□□□□□ -2.06
APOBP04114 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 OR5J1P-201ENST00000313544 939 ntBASIC2.18□□□□□ -2.06
APOBP04114 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
APOBP04114 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.18□□□□□ -2.06
APOBP04114 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.18□□□□□ -2.06
APOBP04114 BX276092.4-201ENST00000452056 248 ntBASIC2.18□□□□□ -2.06
APOBP04114 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.18□□□□□ -2.06
APOBP04114 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.18□□□□□ -2.06
APOBP04114 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.18□□□□□ -2.06
APOBP04114 RNU4-29P-201ENST00000515943 174 ntBASIC2.18□□□□□ -2.06
APOBP04114 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC2.18□□□□□ -2.06
APOBP04114 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.18□□□□□ -2.06
APOBP04114 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.18□□□□□ -2.06
APOBP04114 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.18□□□□□ -2.06
APOBP04114 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC2.18□□□□□ -2.06
APOBP04114 SMG1P4-204ENST00000523028 4131 ntBASIC2.18□□□□□ -2.06
APOBP04114 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.18□□□□□ -2.06
APOBP04114 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.18□□□□□ -2.06
APOBP04114 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 SNORA48.8-201ENST00000391324 134 ntBASIC2.18□□□□□ -2.06
APOBP04114 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
APOBP04114 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.18□□□□□ -2.06
APOBP04114 HSPE1P27-201ENST00000430808 296 ntBASIC2.18□□□□□ -2.06
APOBP04114 TRBV12-2-201ENST00000489763 344 ntBASIC2.18□□□□□ -2.06
APOBP04114 AC103783.1-201ENST00000520506 373 ntBASIC2.18□□□□□ -2.06
APOBP04114 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.18□□□□□ -2.06
APOBP04114 MIR4319-201ENST00000577285 85 ntBASIC2.18□□□□□ -2.06
APOBP04114 AC091905.1-201ENST00000624400 311 ntBASIC2.18□□□□□ -2.06
APOBP04114 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC2.18□□□□□ -2.06
APOBP04114 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
APOBP04114 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
APOBP04114 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 LIPT1P1-201ENST00000415870 1186 ntBASIC2.17□□□□□ -2.06
APOBP04114 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.17□□□□□ -2.06
APOBP04114 KCTD9P3-201ENST00000434597 1169 ntBASIC2.17□□□□□ -2.06
APOBP04114 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC2.17□□□□□ -2.06
APOBP04114 AC087276.1-201ENST00000529659 480 ntBASIC2.17□□□□□ -2.06
APOBP04114 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.17□□□□□ -2.06
APOBP04114 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.17□□□□□ -2.06
APOBP04114 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.17□□□□□ -2.06
APOBP04114 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.17□□□□□ -2.06
APOBP04114 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
APOBP04114 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
APOBP04114 Z95331.1-201ENST00000623075 23112 ntBASIC2.17□□□□□ -2.06
APOBP04114 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.17□□□□□ -2.06
APOBP04114 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.17□□□□□ -2.06
APOBP04114 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 GNG5P1-201ENST00000255500 204 ntBASIC2.17□□□□□ -2.06
APOBP04114 AL024507.1-201ENST00000412741 274 ntBASIC2.17□□□□□ -2.06
APOBP04114 HIGD1AP4-201ENST00000430194 280 ntBASIC2.17□□□□□ -2.06
APOBP04114 CCDC75P1-201ENST00000469247 791 ntBASIC2.17□□□□□ -2.06
APOBP04114 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.17□□□□□ -2.06
APOBP04114 AL139395.1-201ENST00000603662 160 ntBASIC2.17□□□□□ -2.06
APOBP04114 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC2.17□□□□□ -2.06
APOBP04114 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.17□□□□□ -2.06
APOBP04114 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC2.17□□□□□ -2.06
APOBP04114 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
APOBP04114 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
APOBP04114 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
APOBP04114 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
APOBP04114 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
APOBP04114 IL6-203ENST00000401651 539 ntTSL 2 BASIC2.17□□□□□ -2.06
APOBP04114 RNA5SP39-201ENST00000411245 120 ntBASIC2.17□□□□□ -2.06
APOBP04114 REREP1Y-201ENST00000422655 198 ntBASIC2.17□□□□□ -2.06
APOBP04114 REREP2Y-201ENST00000439103 200 ntBASIC2.17□□□□□ -2.06
APOBP04114 NPM1P13-201ENST00000452663 865 ntBASIC2.17□□□□□ -2.06
APOBP04114 AC138832.1-201ENST00000522871 556 ntBASIC2.17□□□□□ -2.06
APOBP04114 AL157762.1-201ENST00000619612 415 ntBASIC2.17□□□□□ -2.06
APOBP04114 BMS1P21-201ENST00000634565 365 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms