Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MTND3P3-201ENST00000505004 126 ntBASIC5.15□□□□□ -1.59
MBD4O95243 AC008885.2-201ENST00000509506 930 ntBASIC5.15□□□□□ -1.59
MBD4O95243 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MBD4O95243 MRPL49P2-201ENST00000521066 465 ntBASIC5.15□□□□□ -1.59
MBD4O95243 AP003730.1-201ENST00000524605 285 ntBASIC5.15□□□□□ -1.59
MBD4O95243 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.15□□□□□ -1.59
MBD4O95243 MTND5P21-201ENST00000531961 522 ntBASIC5.15□□□□□ -1.59
MBD4O95243 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.15□□□□□ -1.59
MBD4O95243 RN7SL176P-201ENST00000580352 264 ntBASIC5.15□□□□□ -1.59
MBD4O95243 AC008507.2-201ENST00000588402 1176 ntBASIC5.15□□□□□ -1.59
MBD4O95243 AL392112.1-201ENST00000605115 829 ntBASIC5.15□□□□□ -1.59
MBD4O95243 AC017076.1-201ENST00000607613 578 ntBASIC5.15□□□□□ -1.59
MBD4O95243 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.15□□□□□ -1.59
MBD4O95243 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MBD4O95243 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
MBD4O95243 AL590396.4-201ENST00000636779 956 ntBASIC5.15□□□□□ -1.59
MBD4O95243 AC008013.2-202ENST00000637965 364 ntBASIC5.15□□□□□ -1.59
MBD4O95243 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
MBD4O95243 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
MBD4O95243 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
MBD4O95243 LARP1BP1-201ENST00000506036 1359 ntBASIC5.15□□□□□ -1.59
MBD4O95243 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
MBD4O95243 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
MBD4O95243 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 AC009951.1-201ENST00000623674 2614 ntBASIC5.14□□□□□ -1.59
MBD4O95243 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.14□□□□□ -1.59
MBD4O95243 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.14□□□□□ -1.59
MBD4O95243 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.14□□□□□ -1.59
MBD4O95243 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 RNU5B-4P-201ENST00000363508 111 ntBASIC5.14□□□□□ -1.59
MBD4O95243 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.14□□□□□ -1.59
MBD4O95243 AC004022.2-201ENST00000413824 193 ntBASIC5.14□□□□□ -1.59
MBD4O95243 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.14□□□□□ -1.59
MBD4O95243 CYCSP10-201ENST00000417973 294 ntBASIC5.14□□□□□ -1.59
MBD4O95243 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.14□□□□□ -1.59
MBD4O95243 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.14□□□□□ -1.59
MBD4O95243 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.14□□□□□ -1.59
MBD4O95243 AL645931.1-201ENST00000439737 410 ntBASIC5.14□□□□□ -1.59
MBD4O95243 AL512326.1-201ENST00000443050 721 ntBASIC5.14□□□□□ -1.59
MBD4O95243 RPS26P30-201ENST00000443431 335 ntBASIC5.14□□□□□ -1.59
MBD4O95243 HMGB1P48-201ENST00000446155 598 ntBASIC5.14□□□□□ -1.59
MBD4O95243 MTND1P33-201ENST00000446251 917 ntBASIC5.14□□□□□ -1.59
MBD4O95243 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.14□□□□□ -1.59
MBD4O95243 RPL23AP65-201ENST00000475608 468 ntBASIC5.14□□□□□ -1.59
MBD4O95243 SNORA31.9-201ENST00000516429 84 ntBASIC5.14□□□□□ -1.59
MBD4O95243 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.14□□□□□ -1.59
MBD4O95243 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.14□□□□□ -1.59
MBD4O95243 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 AL161729.3-201ENST00000603533 673 ntBASIC5.14□□□□□ -1.59
MBD4O95243 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 AC010857.1-201ENST00000606398 594 ntBASIC5.14□□□□□ -1.59
MBD4O95243 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.14□□□□□ -1.59
MBD4O95243 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.14□□□□□ -1.59
MBD4O95243 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.14□□□□□ -1.59
MBD4O95243 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.14□□□□□ -1.59
MBD4O95243 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
MBD4O95243 AC005261.4-201ENST00000600047 1385 ntBASIC5.14□□□□□ -1.59
MBD4O95243 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
MBD4O95243 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
MBD4O95243 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MBD4O95243 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
MBD4O95243 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.13□□□□□ -1.59
MBD4O95243 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
MBD4O95243 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MBD4O95243 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
MBD4O95243 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MBD4O95243 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MBD4O95243 RNU1-20P-201ENST00000363314 162 ntBASIC5.13□□□□□ -1.59
MBD4O95243 SNORD66.1-201ENST00000391230 76 ntBASIC5.13□□□□□ -1.59
MBD4O95243 FABP12P1-201ENST00000401911 322 ntBASIC5.13□□□□□ -1.59
MBD4O95243 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.13□□□□□ -1.59
MBD4O95243 RPL23AP38-201ENST00000423801 469 ntBASIC5.13□□□□□ -1.59
MBD4O95243 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.13□□□□□ -1.59
MBD4O95243 IPMKP1-201ENST00000425988 855 ntBASIC5.13□□□□□ -1.59
MBD4O95243 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.13□□□□□ -1.59
MBD4O95243 AC005002.1-201ENST00000447458 540 ntBASIC5.13□□□□□ -1.59
MBD4O95243 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.13□□□□□ -1.59
MBD4O95243 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
MBD4O95243 AC103987.1-201ENST00000473394 348 ntBASIC5.13□□□□□ -1.59
MBD4O95243 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.13□□□□□ -1.59
MBD4O95243 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.13□□□□□ -1.59
MBD4O95243 AC026414.1-201ENST00000504046 698 ntBASIC5.13□□□□□ -1.59
MBD4O95243 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.13□□□□□ -1.59
MBD4O95243 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MBD4O95243 RPL7L1P13-201ENST00000511702 739 ntBASIC5.13□□□□□ -1.59
MBD4O95243 NPM1P6-201ENST00000521088 871 ntBASIC5.13□□□□□ -1.59
MBD4O95243 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.13□□□□□ -1.59
MBD4O95243 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.13□□□□□ -1.59
MBD4O95243 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms