Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC103710.3-201ENST00000608157 948 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 MIR486-1-201ENST00000612171 68 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 AC123768.4-201ENST00000616244 701 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.81□□□□□ -1.8
SEMA3DO95025 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SEMA3DO95025 BDP1P-201ENST00000582658 1990 ntBASIC3.81□□□□□ -1.8
SEMA3DO95025 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.81□□□□□ -1.8
SEMA3DO95025 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SEMA3DO95025 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SEMA3DO95025 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.81□□□□□ -1.8
SEMA3DO95025 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SEMA3DO95025 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.8□□□□□ -1.8
SEMA3DO95025 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SEMA3DO95025 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SEMA3DO95025 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.8□□□□□ -1.8
SEMA3DO95025 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SEMA3DO95025 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SEMA3DO95025 RNU6-1251P-201ENST00000364502 107 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SEMA3DO95025 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.8□□□□□ -1.8
SEMA3DO95025 OR8G2P-201ENST00000412796 908 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.8□□□□□ -1.8
SEMA3DO95025 AJ239321.1-201ENST00000424255 564 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 AC009965.2-201ENST00000425328 970 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 USP12PY-201ENST00000427677 1064 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 AC087650.1-201ENST00000431445 468 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 KCTD9P3-201ENST00000434597 1169 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 YWHAQP9-201ENST00000445891 512 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.8□□□□□ -1.8
SEMA3DO95025 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.8□□□□□ -1.8
SEMA3DO95025 RNU7-170P-201ENST00000459303 61 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
SEMA3DO95025 AP001086.1-201ENST00000494882 321 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 RPL7P47-201ENST00000497299 556 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 SNX5P1-201ENST00000505757 1041 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 RN7SKP122-201ENST00000515923 296 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.8□□□□□ -1.8
SEMA3DO95025 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.8□□□□□ -1.8
SEMA3DO95025 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.8□□□□□ -1.8
SEMA3DO95025 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.8□□□□□ -1.8
SEMA3DO95025 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.8□□□□□ -1.8
SEMA3DO95025 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.8□□□□□ -1.8
SEMA3DO95025 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.8□□□□□ -1.8
SEMA3DO95025 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.8□□□□□ -1.8
SEMA3DO95025 AL034351.1-201ENST00000605288 668 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 AC010680.4-201ENST00000605334 543 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 RNU4-89P-201ENST00000607443 133 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.8□□□□□ -1.8
SEMA3DO95025 AC019131.2-201ENST00000609071 870 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.8□□□□□ -1.8
SEMA3DO95025 AL139089.1-201ENST00000620372 975 ntBASIC3.8□□□□□ -1.8
SEMA3DO95025 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.8□□□□□ -1.8
SEMA3DO95025 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.8□□□□□ -1.8
SEMA3DO95025 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SEMA3DO95025 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.8□□□□□ -1.8
SEMA3DO95025 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SEMA3DO95025 UBE3AP2-201ENST00000429033 2259 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.79□□□□□ -1.8
SEMA3DO95025 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SEMA3DO95025 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SEMA3DO95025 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SEMA3DO95025 RNU4-23P-201ENST00000362839 140 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 RNA5SP399-201ENST00000364003 117 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 RPS26P8-201ENST00000393490 348 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SEMA3DO95025 AL022722.2-201ENST00000402519 180 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 RHEBP3-201ENST00000411920 351 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 AC048351.1-201ENST00000420064 602 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 MTCO1P45-201ENST00000431457 267 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.79□□□□□ -1.8
SEMA3DO95025 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.79□□□□□ -1.8
SEMA3DO95025 AL157884.3-201ENST00000448273 1184 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 RPL9P32-201ENST00000464118 620 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SEMA3DO95025 RPL7P19-201ENST00000469948 618 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 TMED11P-201ENST00000479478 690 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 AC069499.1-201ENST00000489433 509 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 ATG10-AS1-201ENST00000504846 648 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.79□□□□□ -1.8
SEMA3DO95025 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.79□□□□□ -1.8
SEMA3DO95025 AC008802.1-201ENST00000519121 791 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.79□□□□□ -1.8
SEMA3DO95025 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.79□□□□□ -1.8
SEMA3DO95025 AC087888.1-201ENST00000550884 1254 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 AC025884.1-201ENST00000556034 378 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.79□□□□□ -1.8
SEMA3DO95025 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.79□□□□□ -1.8
SEMA3DO95025 AC006338.2-201ENST00000616864 791 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 AL591424.2-201ENST00000617023 128 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SEMA3DO95025 AC145207.9-201ENST00000623802 325 ntBASIC3.79□□□□□ -1.8
SEMA3DO95025 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
SEMA3DO95025 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SEMA3DO95025 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
SEMA3DO95025 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SEMA3DO95025 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SEMA3DO95025 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms