Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.91□□□□□ -1.94
SSSCA1O60232 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.91□□□□□ -1.94
SSSCA1O60232 AL645931.1-201ENST00000439737 410 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 AL035551.1-201ENST00000446931 348 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.91□□□□□ -1.94
SSSCA1O60232 AP000563.1-201ENST00000490865 758 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 IGKV2-23-201ENST00000518729 323 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 AP006245.1-201ENST00000522549 120 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 LECT2-205ENST00000522943 574 ntTSL 3 BASIC2.91□□□□□ -1.94
SSSCA1O60232 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.91□□□□□ -1.94
SSSCA1O60232 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.91□□□□□ -1.94
SSSCA1O60232 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.91□□□□□ -1.94
SSSCA1O60232 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.91□□□□□ -1.94
SSSCA1O60232 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.91□□□□□ -1.94
SSSCA1O60232 AC005255.1-201ENST00000593748 216 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.91□□□□□ -1.94
SSSCA1O60232 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC2.91□□□□□ -1.94
SSSCA1O60232 Mico1.1-201ENST00000611698 204 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 AL357559.1-201ENST00000622228 274 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 MIR6500-201ENST00000622700 86 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SSSCA1O60232 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SSSCA1O60232 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSSCA1O60232 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSSCA1O60232 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.91□□□□□ -1.94
SSSCA1O60232 RLIMP1-201ENST00000339626 1680 ntBASIC2.91□□□□□ -1.94
SSSCA1O60232 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSSCA1O60232 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.91□□□□□ -1.94
SSSCA1O60232 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSSCA1O60232 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSSCA1O60232 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC2.9□□□□□ -1.94
SSSCA1O60232 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SSSCA1O60232 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SSSCA1O60232 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC2.9□□□□□ -1.95
SSSCA1O60232 SNORD6-201ENST00000365444 73 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 MIR192-201ENST00000384915 110 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SSSCA1O60232 RPL21P65-201ENST00000406094 466 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 RNA5SP107-201ENST00000411358 122 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 RNU6-603P-201ENST00000411403 107 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.9□□□□□ -1.95
SSSCA1O60232 RPS7P13-201ENST00000413955 498 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 AC009237.5-201ENST00000414271 501 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC2.9□□□□□ -1.95
SSSCA1O60232 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 FAR1P1-201ENST00000427163 934 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.9□□□□□ -1.95
SSSCA1O60232 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.9□□□□□ -1.95
SSSCA1O60232 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.9□□□□□ -1.95
SSSCA1O60232 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.9□□□□□ -1.95
SSSCA1O60232 CLIC4P1-201ENST00000453177 535 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.9□□□□□ -1.95
SSSCA1O60232 AC022034.3-201ENST00000471393 478 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.9□□□□□ -1.95
SSSCA1O60232 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.9□□□□□ -1.95
SSSCA1O60232 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.9□□□□□ -1.95
SSSCA1O60232 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC2.9□□□□□ -1.95
SSSCA1O60232 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SSSCA1O60232 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SSSCA1O60232 PDCL2P2-201ENST00000533651 189 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC2.9□□□□□ -1.95
SSSCA1O60232 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.9□□□□□ -1.95
SSSCA1O60232 DUXAP6-201ENST00000553858 601 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 MIR4277-201ENST00000578298 84 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 AC011477.5-201ENST00000586571 259 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 AC123786.2-201ENST00000603459 275 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.9□□□□□ -1.95
SSSCA1O60232 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.9□□□□□ -1.95
SSSCA1O60232 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SSSCA1O60232 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SSSCA1O60232 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SSSCA1O60232 AC058791.1-201ENST00000608412 3198 ntBASIC2.9□□□□□ -1.95
SSSCA1O60232 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSSCA1O60232 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSSCA1O60232 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSSCA1O60232 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSSCA1O60232 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
SSSCA1O60232 U1.1-201ENST00000384101 164 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SSSCA1O60232 CYB5AP4-201ENST00000396692 399 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 MTCO3P31-201ENST00000405526 789 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 U3.39-201ENST00000408569 239 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC2.89□□□□□ -1.95
SSSCA1O60232 USP9YP31-201ENST00000431405 881 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.89□□□□□ -1.95
SSSCA1O60232 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.89□□□□□ -1.95
SSSCA1O60232 AL357552.1-201ENST00000445254 415 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.89□□□□□ -1.95
SSSCA1O60232 OR2AF1P-201ENST00000454899 889 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 CFTRP1-201ENST00000456646 183 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.89□□□□□ -1.95
SSSCA1O60232 HMGN1P18-201ENST00000457642 277 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 CEACAMP4-201ENST00000457676 421 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 AC010618.1-201ENST00000469924 477 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 TRBV8-2-201ENST00000475637 270 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SSSCA1O60232 RNU6-579P-201ENST00000516879 102 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 MTND5P21-201ENST00000531961 522 ntBASIC2.89□□□□□ -1.95
SSSCA1O60232 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms