Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RN7SKP106-201ENST00000410832 272 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 RNU6-272P-201ENST00000411028 104 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AC004022.2-201ENST00000413824 193 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AC013262.1-201ENST00000426710 252 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AC011742.1-201ENST00000431448 434 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC188H7C350 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC188H7C350 AC004865.1-201ENST00000442276 1003 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC188H7C350 OR51B8P-201ENST00000449892 769 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 RPL23AP81-201ENST00000455252 467 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AC092324.1-201ENST00000468671 324 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC188H7C350 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC188H7C350 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC188H7C350 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC188H7C350 AC109458.1-201ENST00000508858 316 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AC008494.2-201ENST00000514544 370 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 IGKV2-38-201ENST00000517443 247 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC188H7C350 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC188H7C350 PCNPP1-201ENST00000552501 511 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC188H7C350 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC188H7C350 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC188H7C350 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC188H7C350 VN1R88P-201ENST00000596787 292 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC188H7C350 AL121873.1-201ENST00000616013 524 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AL121890.3-201ENST00000618494 516 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AL109659.3-201ENST00000624985 950 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AP005264.7-201ENST00000625003 745 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AC006927.2-201ENST00000639256 389 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CCDC188H7C350 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC188H7C350 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC188H7C350 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CCDC188H7C350 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC188H7C350 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC188H7C350 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC188H7C350 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CCDC188H7C350 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC188H7C350 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC188H7C350 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC188H7C350 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC188H7C350 FAM3C2-201ENST00000312214 681 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC188H7C350 SNORD113.2-201ENST00000364166 89 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 RNU6-207P-201ENST00000384137 107 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC188H7C350 ATP5F1P2-201ENST00000398143 760 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 SNORA11F-201ENST00000408237 128 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 RNU6-77P-201ENST00000410554 91 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 AL024507.1-201ENST00000412741 274 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC188H7C350 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC188H7C350 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC188H7C350 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC188H7C350 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC188H7C350 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC188H7C350 HMGB1P45-201ENST00000435986 653 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC188H7C350 RPL12P3-201ENST00000440080 396 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC188H7C350 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC188H7C350 RPL7P31-201ENST00000450192 724 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 MTND2P39-201ENST00000457230 764 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC188H7C350 AC004453.1-201ENST00000487895 408 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC188H7C350 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC188H7C350 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC188H7C350 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 AC005351.1-201ENST00000511152 786 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 PRELID3BP4-201ENST00000515476 571 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 CDH12P4-201ENST00000517835 295 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 CDH12P3-201ENST00000517935 295 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 CDH12P1-201ENST00000518435 295 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC188H7C350 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC188H7C350 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
CCDC188H7C350 AC107016.1-201ENST00000550463 337 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC188H7C350 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC188H7C350 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC188H7C350 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CCDC188H7C350 AC007599.1-201ENST00000568688 1174 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 AC069061.3-201ENST00000582254 823 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC188H7C350 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC188H7C350 AL354984.3-201ENST00000604803 325 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 AL392112.1-201ENST00000605115 829 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 AC024940.4-201ENST00000605507 246 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 AC128687.2-201ENST00000609657 566 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 AC116651.1-201ENST00000609724 556 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC188H7C350 AC022079.2-201ENST00000619739 566 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 AC068870.2-201ENST00000620635 389 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms