Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 HMGB3P13-201ENST00000511263 607 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 RN7SKP31-201ENST00000516354 278 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 COX6B1P6-201ENST00000522347 255 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 AC007599.1-201ENST00000568688 1174 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 AP001094.1-201ENST00000579805 193 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 AC010487.1-201ENST00000594408 1172 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 WISP1-OT1-201ENST00000602893 642 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 NTAN1P1-201ENST00000603150 646 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 AC080078.2-201ENST00000603766 501 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 AL031320.1-201ENST00000604177 357 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 MIR6820-201ENST00000611508 62 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 AC073348.1-201ENST00000623002 331 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 AC084035.1-201ENST00000634543 607 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 RBPJP2-201ENST00000618187 1444 ntBASIC5.81□□□□□ -1.48
PTPDC1A2A3K4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 OR9K1P-202ENST00000641111 3217 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 RNU5D-1-201ENST00000363299 116 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 Y_RNA.599-201ENST00000410489 109 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 CTSL3P-202ENST00000412179 788 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC007559.1-201ENST00000428736 355 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AL591363.1-201ENST00000450091 483 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 SETP11-201ENST00000473027 690 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC010424.1-201ENST00000506336 297 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 MTATP6P22-201ENST00000507369 598 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 IGKV2-36-201ENST00000519999 223 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 HIGD1AP10-201ENST00000527837 282 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AL391156.1-201ENST00000554965 554 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC012435.1-202ENST00000568772 240 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC104687.2-201ENST00000604442 342 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC138965.3-201ENST00000623875 498 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC073869.7-201ENST00000640874 297 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 AC010266.2-201ENST00000564741 3255 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 MTND4P34-201ENST00000572715 1371 ntBASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPDC1A2A3K4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPDC1A2A3K4 AC119744.1-201ENST00000454746 1715 ntBASIC5.79□□□□□ -1.48
PTPDC1A2A3K4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPDC1A2A3K4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.79□□□□□ -1.48
PTPDC1A2A3K4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.79□□□□□ -1.48
PTPDC1A2A3K4 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.79□□□□□ -1.48
PTPDC1A2A3K4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
PTPDC1A2A3K4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PTPDC1A2A3K4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPDC1A2A3K4 AL022393.1-201ENST00000625142 1677 ntBASIC5.79□□□□□ -1.48
PTPDC1A2A3K4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTPDC1A2A3K4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PTPDC1A2A3K4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTPDC1A2A3K4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms