Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PTCH2Q9Y6C5 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.89■■□□□ 1.09
PTCH2Q9Y6C5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.89■■□□□ 1.09
PTCH2Q9Y6C5 KRT8P41-201ENST00000533985 1514 ntBASIC21.89■■□□□ 1.09
PTCH2Q9Y6C5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.89■■□□□ 1.09
PTCH2Q9Y6C5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PTCH2Q9Y6C5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.88■■□□□ 1.09
PTCH2Q9Y6C5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 TSPY19P-201ENST00000418461 509 ntBASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 TSPY18P-201ENST00000441642 509 ntBASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 RASA4DP-201ENST00000460726 1199 ntBASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 AC079776.4-201ENST00000511039 504 ntBASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PTCH2Q9Y6C5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 AC139530.3-201ENST00000620344 690 ntBASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.86■■□□□ 1.09
PTCH2Q9Y6C5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 FEM1AP4-201ENST00000443167 1987 ntBASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTCH2Q9Y6C5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 KRT18P1-202ENST00000452408 1331 ntBASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 MIR4674-201ENST00000582457 87 ntBASIC21.84■■□□□ 1.09
PTCH2Q9Y6C5 SLC25A6P4-201ENST00000586535 553 ntBASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms