Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.26■□□□□ 0.99
SCN10AQ9Y5Y9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 HBZP1-201ENST00000354915 429 ntBASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 VENTXP5-201ENST00000523979 775 ntBASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
SCN10AQ9Y5Y9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCN10AQ9Y5Y9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SCN10AQ9Y5Y9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SCN10AQ9Y5Y9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCN10AQ9Y5Y9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCN10AQ9Y5Y9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.24■□□□□ 0.99
SCN10AQ9Y5Y9 MIR4674-201ENST00000582457 87 ntBASIC21.24■□□□□ 0.99
SCN10AQ9Y5Y9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCN10AQ9Y5Y9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SCN10AQ9Y5Y9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 GCSHP2-201ENST00000560971 527 ntBASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 CR769767.2-201ENST00000622735 460 ntBASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCN10AQ9Y5Y9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 TSPY23P-201ENST00000440136 739 ntBASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 AC140113.3-201ENST00000605663 199 ntBASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 AC036111.1-201ENST00000533973 1582 ntBASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SCN10AQ9Y5Y9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 AC007375.3-201ENST00000600936 2314 ntBASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 GABARAPL3-202ENST00000624044 1851 ntBASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 AL450487.1-201ENST00000426799 995 ntBASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 CLEC4GP1-201ENST00000596555 870 ntBASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.21■□□□□ 0.99
SCN10AQ9Y5Y9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms