Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
RIMBP3Q9UFD9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC30.9■■■□□ 2.54
RIMBP3Q9UFD9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC30.9■■■□□ 2.54
RIMBP3Q9UFD9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC30.9■■■□□ 2.54
RIMBP3Q9UFD9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC30.9■■■□□ 2.54
RIMBP3Q9UFD9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC30.9■■■□□ 2.54
RIMBP3Q9UFD9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
RIMBP3Q9UFD9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
RIMBP3Q9UFD9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC30.89■■■□□ 2.54
RIMBP3Q9UFD9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
RIMBP3Q9UFD9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC30.89■■■□□ 2.54
RIMBP3Q9UFD9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RIMBP3Q9UFD9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC30.89■■■□□ 2.54
RIMBP3Q9UFD9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC30.89■■■□□ 2.54
RIMBP3Q9UFD9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC30.89■■■□□ 2.54
RIMBP3Q9UFD9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RIMBP3Q9UFD9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC30.89■■■□□ 2.54
RIMBP3Q9UFD9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
RIMBP3Q9UFD9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC30.89■■■□□ 2.54
RIMBP3Q9UFD9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
RIMBP3Q9UFD9 AL391807.1-203ENST00000604392 2365 ntBASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 AC242852.2-201ENST00000615738 1807 ntBASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 EMD-201ENST00000369835 966 ntTSL 3 BASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 SCARNA2-201ENST00000458748 420 ntBASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 AL356488.2-201ENST00000602755 427 ntBASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 AC024243.1-201ENST00000609234 778 ntBASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 TMEM179-206ENST00000616017 1645 ntBASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC30.88■■■□□ 2.53
RIMBP3Q9UFD9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
RIMBP3Q9UFD9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC30.87■■■□□ 2.53
RIMBP3Q9UFD9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RIMBP3Q9UFD9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
RIMBP3Q9UFD9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RIMBP3Q9UFD9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
RIMBP3Q9UFD9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC30.87■■■□□ 2.53
RIMBP3Q9UFD9 MED15P5-201ENST00000423150 992 ntBASIC30.87■■■□□ 2.53
RIMBP3Q9UFD9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC30.87■■■□□ 2.53
RIMBP3Q9UFD9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC30.87■■■□□ 2.53
RIMBP3Q9UFD9 FAM197Y3-203ENST00000618346 717 ntBASIC30.87■■■□□ 2.53
RIMBP3Q9UFD9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC30.87■■■□□ 2.53
RIMBP3Q9UFD9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 KRT8P11-201ENST00000409686 1436 ntBASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 SEC1P-202ENST00000473944 940 ntBASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 AL157888.1-201ENST00000631930 593 ntBASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 NSUN5P1-202ENST00000421140 1535 ntBASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 NSUN5P2-203ENST00000457352 1529 ntBASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
RIMBP3Q9UFD9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC30.85■■■□□ 2.53
RIMBP3Q9UFD9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
RIMBP3Q9UFD9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
RIMBP3Q9UFD9 COX20P2-201ENST00000452636 358 ntBASIC30.85■■■□□ 2.53
RIMBP3Q9UFD9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC30.85■■■□□ 2.53
RIMBP3Q9UFD9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC30.85■■■□□ 2.53
RIMBP3Q9UFD9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC30.85■■■□□ 2.53
RIMBP3Q9UFD9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC30.85■■■□□ 2.53
RIMBP3Q9UFD9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
RIMBP3Q9UFD9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC30.85■■■□□ 2.53
RIMBP3Q9UFD9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
RIMBP3Q9UFD9 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC30.85■■■□□ 2.53
RIMBP3Q9UFD9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 AC083906.6-201ENST00000641366 219 ntBASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 AC079781.4-201ENST00000641908 219 ntBASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC30.84■■■□□ 2.53
RIMBP3Q9UFD9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms