Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSFQ9UBX1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 FAM210CP-201ENST00000445714 574 ntBASIC18.21■□□□□ 0.51
CTSFQ9UBX1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 SLC25A1P4-201ENST00000567977 778 ntBASIC18.21■□□□□ 0.51
CTSFQ9UBX1 AP005242.2-201ENST00000580065 1175 ntBASIC18.21■□□□□ 0.51
CTSFQ9UBX1 AP000692.2-201ENST00000608391 879 ntBASIC18.21■□□□□ 0.51
CTSFQ9UBX1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CTSFQ9UBX1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.21■□□□□ 0.5
CTSFQ9UBX1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CTSFQ9UBX1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CTSFQ9UBX1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 LINC01568-207ENST00000641790 1380 ntBASIC18.2■□□□□ 0.5
CTSFQ9UBX1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 FAM207BP-201ENST00000447172 505 ntBASIC18.2■□□□□ 0.5
CTSFQ9UBX1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTSFQ9UBX1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSFQ9UBX1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 RCN1P1-201ENST00000400413 996 ntBASIC18.18■□□□□ 0.5
CTSFQ9UBX1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 MFAP1P1-201ENST00000442257 1255 ntBASIC18.18■□□□□ 0.5
CTSFQ9UBX1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms