Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE7Q9UBL6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE7Q9UBL6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.78■□□□□ 0.6
CPNE7Q9UBL6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE7Q9UBL6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CPNE7Q9UBL6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CPNE7Q9UBL6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPNE7Q9UBL6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPNE7Q9UBL6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE7Q9UBL6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CPNE7Q9UBL6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.77■□□□□ 0.59
CPNE7Q9UBL6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE7Q9UBL6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CPNE7Q9UBL6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 KRT18P22-201ENST00000402024 1347 ntBASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 MFAP1P1-201ENST00000442257 1255 ntBASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 AC096733.2-201ENST00000609937 1394 ntBASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPNE7Q9UBL6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 RCN1P1-201ENST00000400413 996 ntBASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 AC005363.2-201ENST00000618631 242 ntBASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPNE7Q9UBL6 KRT8P41-201ENST00000533985 1514 ntBASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 EGLN1P1-201ENST00000531623 762 ntBASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE7Q9UBL6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms