Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TREM2Q9NZC2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 RPS2P55-201ENST00000397318 883 ntBASIC16.68■□□□□ 0.26
TREM2Q9NZC2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 AC107956.1-201ENST00000494359 873 ntBASIC16.68■□□□□ 0.26
TREM2Q9NZC2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TREM2Q9NZC2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 AC012618.2-201ENST00000428058 849 ntBASIC16.67■□□□□ 0.26
TREM2Q9NZC2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 AC116351.2-201ENST00000606540 1585 ntBASIC16.67■□□□□ 0.26
TREM2Q9NZC2 AP001271.2-201ENST00000624018 1556 ntBASIC16.67■□□□□ 0.26
TREM2Q9NZC2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.67■□□□□ 0.26
TREM2Q9NZC2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREM2Q9NZC2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TREM2Q9NZC2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREM2Q9NZC2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
TREM2Q9NZC2 AP006587.1-201ENST00000534129 1502 ntBASIC16.66■□□□□ 0.26
TREM2Q9NZC2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TREM2Q9NZC2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREM2Q9NZC2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREM2Q9NZC2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREM2Q9NZC2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREM2Q9NZC2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREM2Q9NZC2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms