Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 BX088651.1-201ENST00000540551 451 ntBASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 KRT17P2-201ENST00000300992 1314 ntBASIC18.72■□□□□ 0.59
CUEDC1Q9NWM3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CUEDC1Q9NWM3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 Z82202.1-201ENST00000623446 1880 ntBASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 LINC01465-201ENST00000408887 1940 ntBASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.7■□□□□ 0.58
CUEDC1Q9NWM3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 HLA-A-209ENST00000638375 975 ntBASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.69■□□□□ 0.58
CUEDC1Q9NWM3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 RARRES2P10-201ENST00000564312 460 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms