Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD248Q9HCU0 PTBP1P-201ENST00000554374 1601 ntBASIC20.29■□□□□ 0.84
CD248Q9HCU0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 FAM210CP-201ENST00000445714 574 ntBASIC20.29■□□□□ 0.84
CD248Q9HCU0 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD248Q9HCU0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 AC012306.2-201ENST00000609350 630 ntBASIC20.29■□□□□ 0.84
CD248Q9HCU0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD248Q9HCU0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CD248Q9HCU0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CD248Q9HCU0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD248Q9HCU0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD248Q9HCU0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD248Q9HCU0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CD248Q9HCU0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.28■□□□□ 0.84
CD248Q9HCU0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD248Q9HCU0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD248Q9HCU0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CD248Q9HCU0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CD248Q9HCU0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.28■□□□□ 0.84
CD248Q9HCU0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CD248Q9HCU0 AL355075.4-201ENST00000554988 638 ntBASIC20.28■□□□□ 0.84
CD248Q9HCU0 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.28■□□□□ 0.84
CD248Q9HCU0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.28■□□□□ 0.84
CD248Q9HCU0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.28■□□□□ 0.84
CD248Q9HCU0 LINC01023-201ENST00000606054 436 ntBASIC20.28■□□□□ 0.84
CD248Q9HCU0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CD248Q9HCU0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.28■□□□□ 0.84
CD248Q9HCU0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CD248Q9HCU0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CD248Q9HCU0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.27■□□□□ 0.84
CD248Q9HCU0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CD248Q9HCU0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD248Q9HCU0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CD248Q9HCU0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.27■□□□□ 0.84
CD248Q9HCU0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD248Q9HCU0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.27■□□□□ 0.84
CD248Q9HCU0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CD248Q9HCU0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.27■□□□□ 0.84
CD248Q9HCU0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.27■□□□□ 0.84
CD248Q9HCU0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CD248Q9HCU0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD248Q9HCU0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.27■□□□□ 0.84
CD248Q9HCU0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.27■□□□□ 0.84
CD248Q9HCU0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.27■□□□□ 0.84
CD248Q9HCU0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.27■□□□□ 0.84
CD248Q9HCU0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.27■□□□□ 0.84
CD248Q9HCU0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD248Q9HCU0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD248Q9HCU0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CD248Q9HCU0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CD248Q9HCU0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD248Q9HCU0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CD248Q9HCU0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CD248Q9HCU0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CD248Q9HCU0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CD248Q9HCU0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD248Q9HCU0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CD248Q9HCU0 AC006128.1-201ENST00000624704 1661 ntBASIC20.26■□□□□ 0.83
CD248Q9HCU0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD248Q9HCU0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
CD248Q9HCU0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CD248Q9HCU0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CD248Q9HCU0 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.26■□□□□ 0.83
CD248Q9HCU0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CD248Q9HCU0 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.26■□□□□ 0.83
CD248Q9HCU0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.26■□□□□ 0.83
CD248Q9HCU0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.26■□□□□ 0.83
CD248Q9HCU0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CD248Q9HCU0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.26■□□□□ 0.83
CD248Q9HCU0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CD248Q9HCU0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.26■□□□□ 0.83
CD248Q9HCU0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD248Q9HCU0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD248Q9HCU0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD248Q9HCU0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 AC087499.1-201ENST00000418141 1075 ntBASIC20.25■□□□□ 0.83
CD248Q9HCU0 KRT16P5-201ENST00000455284 522 ntBASIC20.25■□□□□ 0.83
CD248Q9HCU0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.25■□□□□ 0.83
CD248Q9HCU0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.25■□□□□ 0.83
CD248Q9HCU0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.25■□□□□ 0.83
CD248Q9HCU0 AF186192.3-201ENST00000583427 947 ntBASIC20.25■□□□□ 0.83
CD248Q9HCU0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CD248Q9HCU0 AC097493.4-201ENST00000641197 219 ntBASIC20.25■□□□□ 0.83
CD248Q9HCU0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD248Q9HCU0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms