Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 FSCN1P1-201ENST00000568912 1481 ntBASIC22.85■■□□□ 1.25
RNF41Q9H4P4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.85■■□□□ 1.25
RNF41Q9H4P4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF41Q9H4P4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RNF41Q9H4P4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.83■■□□□ 1.25
RNF41Q9H4P4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RNF41Q9H4P4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RNF41Q9H4P4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RNF41Q9H4P4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.83■■□□□ 1.25
RNF41Q9H4P4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.83■■□□□ 1.25
RNF41Q9H4P4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.83■■□□□ 1.25
RNF41Q9H4P4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.83■■□□□ 1.25
RNF41Q9H4P4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.83■■□□□ 1.25
RNF41Q9H4P4 MIR6786-201ENST00000616843 113 ntBASIC22.83■■□□□ 1.25
RNF41Q9H4P4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
RNF41Q9H4P4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.83■■□□□ 1.25
RNF41Q9H4P4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
RNF41Q9H4P4 RCC2P6-201ENST00000526625 1557 ntBASIC22.83■■□□□ 1.25
RNF41Q9H4P4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
RNF41Q9H4P4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 AC004951.3-201ENST00000418645 1148 ntBASIC22.82■■□□□ 1.24
RNF41Q9H4P4 B3GAT3P1-201ENST00000471720 806 ntBASIC22.82■■□□□ 1.24
RNF41Q9H4P4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RNF41Q9H4P4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 REXO1L10P-201ENST00000615707 1290 ntBASIC22.81■■□□□ 1.24
RNF41Q9H4P4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 REXO1L12P-201ENST00000622156 912 ntBASIC22.81■■□□□ 1.24
RNF41Q9H4P4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.81■■□□□ 1.24
RNF41Q9H4P4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.8■■□□□ 1.24
RNF41Q9H4P4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
RNF41Q9H4P4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
RNF41Q9H4P4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RNF41Q9H4P4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RNF41Q9H4P4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.8■■□□□ 1.24
RNF41Q9H4P4 MESTP1-201ENST00000404287 994 ntBASIC22.8■■□□□ 1.24
RNF41Q9H4P4 AC011506.1-201ENST00000474329 610 ntBASIC22.8■■□□□ 1.24
RNF41Q9H4P4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
RNF41Q9H4P4 AC130371.2-201ENST00000619443 611 ntBASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms