Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.34■■□□□ 1.01
UBE2OQ9C0C9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBE2OQ9C0C9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.33■■□□□ 1.01
UBE2OQ9C0C9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBE2OQ9C0C9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBE2OQ9C0C9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.33■■□□□ 1.01
UBE2OQ9C0C9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBE2OQ9C0C9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBE2OQ9C0C9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBE2OQ9C0C9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBE2OQ9C0C9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBE2OQ9C0C9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.33■■□□□ 1.01
UBE2OQ9C0C9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBE2OQ9C0C9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
UBE2OQ9C0C9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.33■■□□□ 1
UBE2OQ9C0C9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UBE2OQ9C0C9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
UBE2OQ9C0C9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.33■■□□□ 1
UBE2OQ9C0C9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
UBE2OQ9C0C9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBE2OQ9C0C9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBE2OQ9C0C9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBE2OQ9C0C9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBE2OQ9C0C9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.32■■□□□ 1
UBE2OQ9C0C9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBE2OQ9C0C9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UBE2OQ9C0C9 STARP1-201ENST00000397973 869 ntBASIC21.32■■□□□ 1
UBE2OQ9C0C9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UBE2OQ9C0C9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.32■■□□□ 1
UBE2OQ9C0C9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBE2OQ9C0C9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.32■■□□□ 1
UBE2OQ9C0C9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBE2OQ9C0C9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.32■■□□□ 1
UBE2OQ9C0C9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.32■■□□□ 1
UBE2OQ9C0C9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
UBE2OQ9C0C9 HLA-A-209ENST00000638375 975 ntBASIC21.32■■□□□ 1
UBE2OQ9C0C9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBE2OQ9C0C9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
UBE2OQ9C0C9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.32■■□□□ 1
UBE2OQ9C0C9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBE2OQ9C0C9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.32■■□□□ 1
UBE2OQ9C0C9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.31■■□□□ 1
UBE2OQ9C0C9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
UBE2OQ9C0C9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
UBE2OQ9C0C9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBE2OQ9C0C9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.31■■□□□ 1
UBE2OQ9C0C9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.31■■□□□ 1
UBE2OQ9C0C9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBE2OQ9C0C9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.31■■□□□ 1
UBE2OQ9C0C9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBE2OQ9C0C9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
UBE2OQ9C0C9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
UBE2OQ9C0C9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
UBE2OQ9C0C9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.31■■□□□ 1
UBE2OQ9C0C9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
UBE2OQ9C0C9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBE2OQ9C0C9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBE2OQ9C0C9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBE2OQ9C0C9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
UBE2OQ9C0C9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.3■■□□□ 1
UBE2OQ9C0C9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.3■■□□□ 1
UBE2OQ9C0C9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.3■■□□□ 1
UBE2OQ9C0C9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.3■■□□□ 1
UBE2OQ9C0C9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
UBE2OQ9C0C9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
UBE2OQ9C0C9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBE2OQ9C0C9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.3■■□□□ 1
UBE2OQ9C0C9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.3■■□□□ 1
UBE2OQ9C0C9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.3■■□□□ 1
UBE2OQ9C0C9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.3■■□□□ 1
UBE2OQ9C0C9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.3■■□□□ 1
UBE2OQ9C0C9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.3■■□□□ 1
UBE2OQ9C0C9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBE2OQ9C0C9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBE2OQ9C0C9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBE2OQ9C0C9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBE2OQ9C0C9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
UBE2OQ9C0C9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBE2OQ9C0C9 KRT8P17-201ENST00000453110 1448 ntBASIC21.29■■□□□ 1
UBE2OQ9C0C9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBE2OQ9C0C9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBE2OQ9C0C9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBE2OQ9C0C9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.29■■□□□ 1
UBE2OQ9C0C9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBE2OQ9C0C9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
UBE2OQ9C0C9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBE2OQ9C0C9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBE2OQ9C0C9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.29■■□□□ 1
UBE2OQ9C0C9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.29■■□□□ 1
UBE2OQ9C0C9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.29■■□□□ 1
UBE2OQ9C0C9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.29■■□□□ 1
UBE2OQ9C0C9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBE2OQ9C0C9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.29■■□□□ 1
UBE2OQ9C0C9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.29■■□□□ 1
UBE2OQ9C0C9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBE2OQ9C0C9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.29■■□□□ 1
UBE2OQ9C0C9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
UBE2OQ9C0C9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBE2OQ9C0C9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms