Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.05■□□□□ 0.32
VRK1Q99986 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.05■□□□□ 0.32
VRK1Q99986 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VRK1Q99986 AC124016.1-201ENST00000609552 612 ntBASIC17.05■□□□□ 0.32
VRK1Q99986 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.05■□□□□ 0.32
VRK1Q99986 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
VRK1Q99986 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
VRK1Q99986 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
VRK1Q99986 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VRK1Q99986 AC090340.1-201ENST00000620778 4980 ntBASIC17.04■□□□□ 0.32
VRK1Q99986 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VRK1Q99986 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
VRK1Q99986 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
VRK1Q99986 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
VRK1Q99986 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
VRK1Q99986 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.04■□□□□ 0.32
VRK1Q99986 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.04■□□□□ 0.32
VRK1Q99986 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.04■□□□□ 0.32
VRK1Q99986 AC110285.5-201ENST00000611501 352 ntBASIC17.04■□□□□ 0.32
VRK1Q99986 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.04■□□□□ 0.32
VRK1Q99986 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.04■□□□□ 0.32
VRK1Q99986 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VRK1Q99986 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.03■□□□□ 0.32
VRK1Q99986 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
VRK1Q99986 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.03■□□□□ 0.32
VRK1Q99986 AC124283.5-201ENST00000624661 1809 ntBASIC17.03■□□□□ 0.32
VRK1Q99986 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
VRK1Q99986 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.03■□□□□ 0.32
VRK1Q99986 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
VRK1Q99986 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
VRK1Q99986 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
VRK1Q99986 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.03■□□□□ 0.32
VRK1Q99986 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VRK1Q99986 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.03■□□□□ 0.32
VRK1Q99986 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.03■□□□□ 0.32
VRK1Q99986 Z99916.2-201ENST00000604037 246 ntBASIC17.03■□□□□ 0.32
VRK1Q99986 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
VRK1Q99986 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
VRK1Q99986 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VRK1Q99986 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VRK1Q99986 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VRK1Q99986 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VRK1Q99986 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
VRK1Q99986 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
VRK1Q99986 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VRK1Q99986 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.02■□□□□ 0.32
VRK1Q99986 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VRK1Q99986 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VRK1Q99986 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
VRK1Q99986 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.02■□□□□ 0.32
VRK1Q99986 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.02■□□□□ 0.32
VRK1Q99986 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.02■□□□□ 0.32
VRK1Q99986 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VRK1Q99986 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VRK1Q99986 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.02■□□□□ 0.31
VRK1Q99986 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
VRK1Q99986 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VRK1Q99986 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
VRK1Q99986 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.02■□□□□ 0.31
VRK1Q99986 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.02■□□□□ 0.31
VRK1Q99986 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
VRK1Q99986 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.02■□□□□ 0.31
VRK1Q99986 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VRK1Q99986 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.02■□□□□ 0.31
VRK1Q99986 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.01■□□□□ 0.31
VRK1Q99986 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.01■□□□□ 0.31
VRK1Q99986 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms