Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 AC141257.4-201ENST00000634557 245 ntBASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 AC136944.6-201ENST00000634818 245 ntBASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 AL031432.5-201ENST00000641059 760 ntBASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SLC46A1Q96NT5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.52■□□□□ 0.55
SLC46A1Q96NT5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC46A1Q96NT5 PHGDH-210ENST00000641115 1638 ntBASIC18.52■□□□□ 0.55
SLC46A1Q96NT5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SLC46A1Q96NT5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC46A1Q96NT5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SLC46A1Q96NT5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.52■□□□□ 0.55
SLC46A1Q96NT5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SLC46A1Q96NT5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC46A1Q96NT5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 AC099778.1-201ENST00000568593 1911 ntBASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 AC011558.1-201ENST00000623459 338 ntBASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC46A1Q96NT5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 PCED1CP-201ENST00000419887 785 ntBASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 TSPY17P-201ENST00000450329 467 ntBASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 AL512604.3-201ENST00000569583 964 ntBASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 AL023803.3-201ENST00000615559 522 ntBASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 AL121956.5-201ENST00000625261 221 ntBASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SLC46A1Q96NT5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 FAM86EP-206ENST00000510506 987 ntBASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC46A1Q96NT5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms