Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CALR3Q96L12 AC104417.2-201ENST00000562989 1793 ntBASIC20.44■□□□□ 0.86
CALR3Q96L12 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CALR3Q96L12 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CALR3Q96L12 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CALR3Q96L12 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CALR3Q96L12 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.44■□□□□ 0.86
CALR3Q96L12 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.44■□□□□ 0.86
CALR3Q96L12 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CALR3Q96L12 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.44■□□□□ 0.86
CALR3Q96L12 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.44■□□□□ 0.86
CALR3Q96L12 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.44■□□□□ 0.86
CALR3Q96L12 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CALR3Q96L12 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.44■□□□□ 0.86
CALR3Q96L12 AL050303.2-201ENST00000619798 666 ntBASIC20.44■□□□□ 0.86
CALR3Q96L12 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.44■□□□□ 0.86
CALR3Q96L12 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CALR3Q96L12 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CALR3Q96L12 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CALR3Q96L12 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.44■□□□□ 0.86
CALR3Q96L12 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.44■□□□□ 0.86
CALR3Q96L12 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CALR3Q96L12 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CALR3Q96L12 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.44■□□□□ 0.86
CALR3Q96L12 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CALR3Q96L12 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CALR3Q96L12 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.43■□□□□ 0.86
CALR3Q96L12 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CALR3Q96L12 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CALR3Q96L12 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CALR3Q96L12 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CALR3Q96L12 AC093525.10-201ENST00000625130 1569 ntBASIC20.43■□□□□ 0.86
CALR3Q96L12 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CALR3Q96L12 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CALR3Q96L12 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CALR3Q96L12 CDCA4P2-201ENST00000441182 718 ntBASIC20.43■□□□□ 0.86
CALR3Q96L12 RPS2P52-201ENST00000469610 820 ntBASIC20.43■□□□□ 0.86
CALR3Q96L12 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.43■□□□□ 0.86
CALR3Q96L12 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.43■□□□□ 0.86
CALR3Q96L12 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CALR3Q96L12 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CALR3Q96L12 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CALR3Q96L12 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CALR3Q96L12 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.43■□□□□ 0.86
CALR3Q96L12 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CALR3Q96L12 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CALR3Q96L12 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.43■□□□□ 0.86
CALR3Q96L12 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CALR3Q96L12 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.42■□□□□ 0.86
CALR3Q96L12 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CALR3Q96L12 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CALR3Q96L12 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CALR3Q96L12 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CALR3Q96L12 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CALR3Q96L12 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.42■□□□□ 0.86
CALR3Q96L12 MIPEPP3-201ENST00000412105 444 ntBASIC20.42■□□□□ 0.86
CALR3Q96L12 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CALR3Q96L12 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.42■□□□□ 0.86
CALR3Q96L12 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.42■□□□□ 0.86
CALR3Q96L12 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.42■□□□□ 0.86
CALR3Q96L12 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CALR3Q96L12 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CALR3Q96L12 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.42■□□□□ 0.86
CALR3Q96L12 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CALR3Q96L12 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CALR3Q96L12 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.42■□□□□ 0.86
CALR3Q96L12 AC006333.2-201ENST00000607957 2099 ntBASIC20.42■□□□□ 0.86
CALR3Q96L12 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.42■□□□□ 0.86
CALR3Q96L12 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CALR3Q96L12 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CALR3Q96L12 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.41■□□□□ 0.86
CALR3Q96L12 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CALR3Q96L12 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CALR3Q96L12 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CALR3Q96L12 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CALR3Q96L12 FP475955.4-201ENST00000623131 1990 ntBASIC20.41■□□□□ 0.86
CALR3Q96L12 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CALR3Q96L12 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.41■□□□□ 0.86
CALR3Q96L12 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CALR3Q96L12 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.41■□□□□ 0.86
CALR3Q96L12 DUSP5P2-201ENST00000426873 1033 ntBASIC20.41■□□□□ 0.86
CALR3Q96L12 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.41■□□□□ 0.86
CALR3Q96L12 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.41■□□□□ 0.86
CALR3Q96L12 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CALR3Q96L12 AC079598.2-202ENST00000546624 1451 ntBASIC20.41■□□□□ 0.86
CALR3Q96L12 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CALR3Q96L12 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.41■□□□□ 0.86
CALR3Q96L12 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CALR3Q96L12 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.41■□□□□ 0.86
CALR3Q96L12 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CALR3Q96L12 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CALR3Q96L12 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CALR3Q96L12 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CALR3Q96L12 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CALR3Q96L12 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CALR3Q96L12 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.41■□□□□ 0.86
CALR3Q96L12 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CALR3Q96L12 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CALR3Q96L12 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CALR3Q96L12 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms