Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP6Q96FZ7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP6Q96FZ7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP6Q96FZ7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 AC123595.1-201ENST00000440769 1046 ntBASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP6Q96FZ7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 AC067852.2-201ENST00000590513 2313 ntBASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 CCDC92B-201ENST00000575506 885 ntBASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 TERF1P2-201ENST00000583350 1212 ntBASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP6Q96FZ7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 PGM5P4-201ENST00000421970 445 ntBASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 KRT18P14-201ENST00000534205 1250 ntBASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 AC104187.1-201ENST00000607510 612 ntBASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 AL356652.1-201ENST00000615962 565 ntBASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP6Q96FZ7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CHMP6Q96FZ7 AC010141.2-201ENST00000452426 721 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms