Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTP4Q96DX8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTP4Q96DX8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTP4Q96DX8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RTP4Q96DX8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTP4Q96DX8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTP4Q96DX8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTP4Q96DX8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTP4Q96DX8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTP4Q96DX8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTP4Q96DX8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTP4Q96DX8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTP4Q96DX8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTP4Q96DX8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTP4Q96DX8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTP4Q96DX8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTP4Q96DX8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.73■□□□□ 0.75
RTP4Q96DX8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTP4Q96DX8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTP4Q96DX8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTP4Q96DX8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.72■□□□□ 0.75
RTP4Q96DX8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RTP4Q96DX8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTP4Q96DX8 FP475955.4-201ENST00000623131 1990 ntBASIC19.72■□□□□ 0.75
RTP4Q96DX8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTP4Q96DX8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTP4Q96DX8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTP4Q96DX8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RTP4Q96DX8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTP4Q96DX8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
RTP4Q96DX8 GCSHP5-201ENST00000443090 522 ntBASIC19.72■□□□□ 0.75
RTP4Q96DX8 AC128676.1-201ENST00000454392 318 ntBASIC19.72■□□□□ 0.75
RTP4Q96DX8 AC026366.1-201ENST00000488803 879 ntBASIC19.72■□□□□ 0.75
RTP4Q96DX8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RTP4Q96DX8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.72■□□□□ 0.75
RTP4Q96DX8 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.72■□□□□ 0.75
RTP4Q96DX8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RTP4Q96DX8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.72■□□□□ 0.75
RTP4Q96DX8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RTP4Q96DX8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTP4Q96DX8 IRX1P1-201ENST00000438849 1838 ntBASIC19.72■□□□□ 0.75
RTP4Q96DX8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.71■□□□□ 0.75
RTP4Q96DX8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.71■□□□□ 0.75
RTP4Q96DX8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
RTP4Q96DX8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.71■□□□□ 0.75
RTP4Q96DX8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RTP4Q96DX8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.71■□□□□ 0.75
RTP4Q96DX8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.71■□□□□ 0.75
RTP4Q96DX8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RTP4Q96DX8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTP4Q96DX8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RTP4Q96DX8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.7■□□□□ 0.74
RTP4Q96DX8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.7■□□□□ 0.74
RTP4Q96DX8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.7■□□□□ 0.74
RTP4Q96DX8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.7■□□□□ 0.74
RTP4Q96DX8 AP003097.1-201ENST00000530657 1135 ntBASIC19.7■□□□□ 0.74
RTP4Q96DX8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.7■□□□□ 0.74
RTP4Q96DX8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.7■□□□□ 0.74
RTP4Q96DX8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.7■□□□□ 0.74
RTP4Q96DX8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RTP4Q96DX8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTP4Q96DX8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms