Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SNIP1Q8TAD8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 AC004870.1-201ENST00000315132 882 ntBASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 PRELID1P1-202ENST00000567272 903 ntBASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 AC111152.3-201ENST00000569699 673 ntBASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 NEK4P2-201ENST00000580004 1012 ntBASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNIP1Q8TAD8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 KRT8P45-201ENST00000414328 1447 ntBASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 LINC01311-201ENST00000565162 1445 ntBASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 PVRIG2P-201ENST00000435460 978 ntBASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 FAAHP1-202ENST00000446499 1238 ntBASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 KRT17P6-201ENST00000453795 1220 ntBASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 MIR3652-201ENST00000579335 131 ntBASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 Z98882.1-201ENST00000622160 2253 ntBASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.24■□□□□ 0.51
SNIP1Q8TAD8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 AL049796.1-201ENST00000565336 1766 ntBASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 GPALPP1-207ENST00000611650 899 ntBASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 CR769767.2-201ENST00000622735 460 ntBASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 PHGDH-210ENST00000641115 1638 ntBASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNIP1Q8TAD8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNIP1Q8TAD8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms