Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 ZNF815P-204ENST00000434898 1737 ntBASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CLHC1Q8NHS4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 AC083880.1-201ENST00000608266 535 ntBASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.54■□□□□ 0.56
CLHC1Q8NHS4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 PNMA6B-201ENST00000538162 1200 ntBASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 HLA-B-256ENST00000639848 1089 ntBASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLHC1Q8NHS4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLHC1Q8NHS4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLHC1Q8NHS4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLHC1Q8NHS4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLHC1Q8NHS4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLHC1Q8NHS4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLHC1Q8NHS4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.52■□□□□ 0.56
CLHC1Q8NHS4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLHC1Q8NHS4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLHC1Q8NHS4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms