Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 AC116351.2-201ENST00000606540 1585 ntBASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CLDND2Q8NHS1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 NIFKP9-201ENST00000419265 221 ntBASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 NUDT16P1-203ENST00000513809 620 ntBASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 CR392000.1-201ENST00000624770 1228 ntBASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDND2Q8NHS1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 FAM210CP-201ENST00000445714 574 ntBASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 KSR1P1-201ENST00000446298 240 ntBASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 AL512408.1-201ENST00000569378 2000 ntBASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDND2Q8NHS1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 AC018553.1-201ENST00000616682 1458 ntBASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 MMP23A-201ENST00000234610 1017 ntBASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 AC099778.1-201ENST00000568593 1911 ntBASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLDND2Q8NHS1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms