Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 AC233702.5-201ENST00000584107 538 ntBASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.36■□□□□ 0.85
SCUBE3Q8IX30 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 KSR1P1-201ENST00000446298 240 ntBASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 AC073195.1-201ENST00000607241 877 ntBASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 CR392000.1-201ENST00000624770 1228 ntBASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SCUBE3Q8IX30 SDHAP1-207ENST00000440850 2000 ntBASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 AC012618.2-201ENST00000428058 849 ntBASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 AL445675.2-201ENST00000620291 557 ntBASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.34■□□□□ 0.85
SCUBE3Q8IX30 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 FAM197Y1-201ENST00000421178 764 ntBASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 AL160286.2-201ENST00000567150 934 ntBASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 AL049637.2-201ENST00000641778 930 ntBASIC20.33■□□□□ 0.85
SCUBE3Q8IX30 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.33■□□□□ 0.84
SCUBE3Q8IX30 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
SCUBE3Q8IX30 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SCUBE3Q8IX30 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SCUBE3Q8IX30 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SCUBE3Q8IX30 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCUBE3Q8IX30 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SCUBE3Q8IX30 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.33■□□□□ 0.84
SCUBE3Q8IX30 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SCUBE3Q8IX30 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCUBE3Q8IX30 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 CD177P1-201ENST00000606252 935 ntBASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SCUBE3Q8IX30 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms