Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 FAM207BP-201ENST00000447172 505 ntBASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 AC091390.4-202ENST00000476426 537 ntBASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 KRT18P21-201ENST00000515767 1272 ntBASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 AC012306.2-201ENST00000609350 630 ntBASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN4BQ8IWT1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 AP000692.2-201ENST00000608391 879 ntBASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 LINC01568-207ENST00000641790 1380 ntBASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN4BQ8IWT1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 AC010947.1-201ENST00000623454 693 ntBASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN4BQ8IWT1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.39■□□□□ 0.86
SCN4BQ8IWT1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCN4BQ8IWT1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SCN4BQ8IWT1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCN4BQ8IWT1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCN4BQ8IWT1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN4BQ8IWT1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 AP005242.2-201ENST00000580065 1175 ntBASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms