Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00346Q8IVM7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00346Q8IVM7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 LINC01465-201ENST00000408887 1940 ntBASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 YBX1P10-201ENST00000444752 975 ntBASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 TEX21P-204ENST00000641479 1693 ntBASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00346Q8IVM7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00346Q8IVM7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC00346Q8IVM7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
LINC00346Q8IVM7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC00346Q8IVM7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
LINC00346Q8IVM7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
LINC00346Q8IVM7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 KRT8P8-201ENST00000434750 1448 ntBASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.08■□□□□ 0.32
LINC00346Q8IVM7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms