Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CROCCP3Q8IVE0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CROCCP3Q8IVE0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CROCCP3Q8IVE0 AC093525.10-201ENST00000625130 1569 ntBASIC17.52■□□□□ 0.39
CROCCP3Q8IVE0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CROCCP3Q8IVE0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CROCCP3Q8IVE0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.52■□□□□ 0.39
CROCCP3Q8IVE0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.52■□□□□ 0.39
CROCCP3Q8IVE0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 RARRES2P11-201ENST00000635158 484 ntBASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CROCCP3Q8IVE0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 LINC00896-202ENST00000609602 2128 ntBASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 BX842568.3-201ENST00000418104 571 ntBASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 AC008764.6-201ENST00000595909 2069 ntBASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CROCCP3Q8IVE0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 AL512631.2-201ENST00000604634 923 ntBASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CROCCP3Q8IVE0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms