Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 BX276092.5-203ENST00000456199 560 ntBASIC16.35■□□□□ 0.21
CSMD2Q7Z408 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 AL162741.1-201ENST00000565563 1558 ntBASIC16.35■□□□□ 0.21
CSMD2Q7Z408 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 FAM220CP-201ENST00000395253 831 ntBASIC16.35■□□□□ 0.21
CSMD2Q7Z408 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CSMD2Q7Z408 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 AC091304.2-201ENST00000564639 760 ntBASIC16.34■□□□□ 0.21
CSMD2Q7Z408 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 TPSP2-201ENST00000561760 610 ntBASIC16.34■□□□□ 0.21
CSMD2Q7Z408 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.34■□□□□ 0.21
CSMD2Q7Z408 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CSMD2Q7Z408 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSMD2Q7Z408 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSMD2Q7Z408 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CSMD2Q7Z408 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
CSMD2Q7Z408 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.33■□□□□ 0.21
CSMD2Q7Z408 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.33■□□□□ 0.21
CSMD2Q7Z408 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CSMD2Q7Z408 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.33■□□□□ 0.21
CSMD2Q7Z408 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.33■□□□□ 0.21
CSMD2Q7Z408 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 FOSL1P1-201ENST00000511041 816 ntBASIC16.33■□□□□ 0.2
CSMD2Q7Z408 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 AL121912.1-201ENST00000603683 238 ntBASIC16.33■□□□□ 0.2
CSMD2Q7Z408 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.33■□□□□ 0.2
CSMD2Q7Z408 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 AC092865.5-201ENST00000545435 363 ntBASIC16.32■□□□□ 0.2
CSMD2Q7Z408 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 AL590627.1-203ENST00000421194 1026 ntBASIC16.32■□□□□ 0.2
CSMD2Q7Z408 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSMD2Q7Z408 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms