Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD3Q7Z407 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 PHGDH-210ENST00000641115 1638 ntBASIC13.47□□□□□ -0.25
CSMD3Q7Z407 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 AC016734.2-201ENST00000624325 1377 ntBASIC13.47□□□□□ -0.25
CSMD3Q7Z407 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD3Q7Z407 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 AC007225.1-201ENST00000566331 1836 ntBASIC13.46□□□□□ -0.25
CSMD3Q7Z407 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 KRT18P1-202ENST00000452408 1331 ntBASIC13.46□□□□□ -0.25
CSMD3Q7Z407 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.46□□□□□ -0.25
CSMD3Q7Z407 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CSMD3Q7Z407 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
CSMD3Q7Z407 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CSMD3Q7Z407 AL022342.1-201ENST00000400363 863 ntBASIC13.46□□□□□ -0.26
CSMD3Q7Z407 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CSMD3Q7Z407 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CSMD3Q7Z407 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CSMD3Q7Z407 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.46□□□□□ -0.26
CSMD3Q7Z407 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 AL049796.1-201ENST00000565336 1766 ntBASIC13.45□□□□□ -0.26
CSMD3Q7Z407 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms